RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ADGRF4Q8IZF3 695 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 PHF20Q9BVI0 1012 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 FOXP1Q9H334 677 aaPredicted RBP16.54■□□□□ 0.24
SHMT2-208ENST00000553868 BARHL2Q9NY43 387 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 VPS54Q9P1Q0 977 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 FEM1BQ9UK73 627 aa16.54■□□□□ 0.24
SHMT2-208ENST00000553868 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 TMEM232C9JQI7 657 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 ZBTB5O15062 677 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 PGK2P07205 417 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 ZNF865P0CJ78 1059 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-208ENST00000553868 NCLP19338 710 aaKnown RBP16.53■□□□□ 0.24
SHMT2-208ENST00000553868 POU3F3P20264 500 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-208ENST00000553868 KRT2P35908 639 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 PLS1Q14651 629 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 SLC35G1Q2M3R5 365 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 CCSAPQ6IQ19 270 aaPredicted RBP16.53■□□□□ 0.24
SHMT2-208ENST00000553868 TTBK2Q6IQ55 1244 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 PPP1R18Q6NYC8 613 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 DIS3L2Q8IYB7 885 aaKnown RBP16.53■□□□□ 0.24
SHMT2-208ENST00000553868 SPICE1Q8N0Z3 855 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 KLHDC9Q8NEP7 349 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 MTMR8Q96EF0 704 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 PIGSQ96S52 555 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 TSEN34Q9BSV6 310 aaKnown RBP16.53■□□□□ 0.24
SHMT2-208ENST00000553868 JMJD4Q9H9V9 463 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 SLC5A4Q9NY91 659 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 CFAP45Q9UL16 551 aa16.53■□□□□ 0.24
SHMT2-208ENST00000553868 ARHGEF15O94989 841 aa16.52■□□□□ 0.24
SHMT2-208ENST00000553868 CA3P07451 260 aa16.52■□□□□ 0.24
SHMT2-208ENST00000553868 U2AF2P26368 475 aaKnown RBP eCLIP16.52■□□□□ 0.24
SHMT2-208ENST00000553868 SLC16A2P36021 539 aa16.52■□□□□ 0.24
SHMT2-208ENST00000553868 NAPAP54920 295 aa16.52■□□□□ 0.24
SHMT2-208ENST00000553868 FAM83BQ5T0W9 1011 aa16.52■□□□□ 0.24
SHMT2-208ENST00000553868 WWC2Q6AWC2 1192 aa16.52■□□□□ 0.24
SHMT2-208ENST00000553868 FAM126BQ8IXS8 530 aa16.52■□□□□ 0.24
SHMT2-208ENST00000553868 NUP88Q99567 741 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-208ENST00000553868 MTIF3Q9H2K0 278 aaKnown RBP16.52■□□□□ 0.24
SHMT2-208ENST00000553868 CPVLQ9H3G5 476 aa16.52■□□□□ 0.24
SHMT2-208ENST00000553868 GJB4Q9NTQ9 266 aa16.52■□□□□ 0.24
SHMT2-208ENST00000553868 KCNJ14Q9UNX9 436 aa16.52■□□□□ 0.24
SHMT2-208ENST00000553868 PCDHA11Q9Y5I1 949 aa16.52■□□□□ 0.24
SHMT2-208ENST00000553868 ESYT2A0FGR8 921 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 STXBP3O00186 592 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 AKR1A1P14550 325 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 GNA11P29992 359 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 CCL23P55773 120 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 GJD3Q8N144 294 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 SHCBP1Q8NEM2 672 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 BICD2Q8TD16 824 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 VTI1AQ96AJ9 217 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 TINF2Q9BSI4 451 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 SCAND2PQ9GZW5 306 aaPredicted RBP16.51■□□□□ 0.23
SHMT2-208ENST00000553868 GLT8D2Q9H1C3 349 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 C6orf50Q9HD87 102 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 SLC4A7Q9Y6M7 1214 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 ZDBF2Q9HCK1 2354 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 MYH6P13533 1939 aa16.51■□□□□ 0.23
SHMT2-208ENST00000553868 ZNF318Q5VUA4 2279 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 MROH7Q68CQ1 1323 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 MOXD2PA6NHM9 499 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 ZBBXA8MT70 800 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 DNM1Q05193 864 aaKnown RBP16.5■□□□□ 0.23
SHMT2-208ENST00000553868 COG2Q14746 738 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 CDC37Q16543 378 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-208ENST00000553868 FOXD4L6Q3SYB3 417 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-208ENST00000553868 FOXD4L3Q6VB84 417 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-208ENST00000553868 SPRED2Q7Z698 418 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 DAGLBQ8NCG7 672 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 ARNTL2Q8WYA1 636 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 GPKOWQ92917 476 aaPredicted RBP eCLIP16.5■□□□□ 0.23
SHMT2-208ENST00000553868 GLT1D1Q96MS3 346 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 NRBP1Q9UHY1 535 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 PNMA2Q9UL42 364 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 PRR12Q9ULL5 1215 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 PCDHA4Q9UN74 947 aa16.5■□□□□ 0.23
SHMT2-208ENST00000553868 BTBD18B2RXH4 712 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 ARVCFO00192 962 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 FDX1P10109 184 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 FCER1AP12319 257 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 ATP2A2P16615 1042 aaKnown RBP16.49■□□□□ 0.23
SHMT2-208ENST00000553868 KIAA1755Q5JYT7 1200 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 TEX2Q8IWB9 1127 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 BLIDQ8IZY5 108 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 ABRAQ8N0Z2 381 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 VWCEQ96DN2 955 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 AMNQ9BXJ7 453 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 TANGO6Q9C0B7 1094 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 MROH8Q9H579 483 aa16.49■□□□□ 0.23
SHMT2-208ENST00000553868 NOL7Q9UMY1 257 aaKnown RBP16.49■□□□□ 0.23
SHMT2-208ENST00000553868 ELP1O95163 1332 aa16.48■□□□□ 0.23
SHMT2-208ENST00000553868 ASGR1P07306 291 aa16.48■□□□□ 0.23
SHMT2-208ENST00000553868 SSTR3P32745 418 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-208ENST00000553868 QRICH1Q2TAL8 776 aa16.48■□□□□ 0.23
SHMT2-208ENST00000553868 RILPL1Q5EBL4 403 aa16.48■□□□□ 0.23
SHMT2-208ENST00000553868 MYSM1Q5VVJ2 828 aa16.48■□□□□ 0.23
SHMT2-208ENST00000553868 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-208ENST00000553868 FBXO11Q86XK2 927 aa16.48■□□□□ 0.23
SHMT2-208ENST00000553868 FAM178BQ8IXR5 827 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms