RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 LAMC2Q13753 1193 aa16.32■□□□□ 0.2
PRKCH-207ENST00000553831 PKN1Q16512 942 aa16.32■□□□□ 0.2
PRKCH-207ENST00000553831 CELF3Q5SZQ8 465 aaKnown RBP16.32■□□□□ 0.2
PRKCH-207ENST00000553831 MYSM1Q5VVJ2 828 aa16.32■□□□□ 0.2
PRKCH-207ENST00000553831 XRRA1Q6P2D8 792 aa16.32■□□□□ 0.2
PRKCH-207ENST00000553831 PPTC7Q8NI37 304 aa16.32■□□□□ 0.2
PRKCH-207ENST00000553831 PPP1R13LQ8WUF5 828 aa16.32■□□□□ 0.2
PRKCH-207ENST00000553831 SEZ6LQ9BYH1 1024 aa16.32■□□□□ 0.2
PRKCH-207ENST00000553831 PCDHA6Q9UN73 950 aa16.32■□□□□ 0.2
PRKCH-207ENST00000553831 PCDHA8Q9Y5H6 950 aa16.32■□□□□ 0.2
PRKCH-207ENST00000553831 SMCO2A6NFE2 343 aa16.31■□□□□ 0.2
PRKCH-207ENST00000553831 PRPF3O43395 683 aaKnown RBP16.31■□□□□ 0.2
PRKCH-207ENST00000553831 FIBPO43427 364 aa16.31■□□□□ 0.2
PRKCH-207ENST00000553831 B4GALT4O60513 344 aa16.31■□□□□ 0.2
PRKCH-207ENST00000553831 IFNAR1P17181 557 aa16.31■□□□□ 0.2
PRKCH-207ENST00000553831 NBPF20Q3BBV1 942 aa16.31■□□□□ 0.2
PRKCH-207ENST00000553831 ZNF274Q96GC6 653 aaPredicted RBP16.31■□□□□ 0.2
PRKCH-207ENST00000553831 PGBD1Q96JS3 809 aa16.31■□□□□ 0.2
PRKCH-207ENST00000553831 SPATA33Q96N06 139 aa16.31■□□□□ 0.2
PRKCH-207ENST00000553831 SLC26A6Q9BXS9 759 aa16.31■□□□□ 0.2
PRKCH-207ENST00000553831 PPP1R12CQ9BZL4 782 aa16.31■□□□□ 0.2
PRKCH-207ENST00000553831 TRPV6Q9H1D0 765 aa16.31■□□□□ 0.2
PRKCH-207ENST00000553831 ALDH8A1Q9H2A2 487 aaPredicted RBP16.31■□□□□ 0.2
PRKCH-207ENST00000553831 SPATA31C2B4DYI2 1134 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
PRKCH-207ENST00000553831 TIMP1P01033 207 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 ZNF286BP0CG31 522 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 AKAP17AQ02040 695 aaKnown RBP16.3■□□□□ 0.2
PRKCH-207ENST00000553831 STK3Q13188 491 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 DGKDQ16760 1214 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 HSDL1Q3SXM5 330 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 FAM47CQ5HY64 1035 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 TEX2Q8IWB9 1127 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 KAT2BQ92831 832 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 IL17RAQ96F46 866 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 RNF26Q9BY78 433 aaPredicted RBP16.3■□□□□ 0.2
PRKCH-207ENST00000553831 BCAS3Q9H6U6 928 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 EHMT1Q9H9B1 1298 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 MLXIPQ9HAP2 919 aa16.3■□□□□ 0.2
PRKCH-207ENST00000553831 TRMT13Q9NUP7 481 aaKnown RBP16.3■□□□□ 0.2
PRKCH-207ENST00000553831 SOX1O00570 391 aaPredicted RBP16.29■□□□□ 0.2
PRKCH-207ENST00000553831 HOXD8P13378 290 aaPredicted RBP16.29■□□□□ 0.2
PRKCH-207ENST00000553831 CLK2P49760 499 aaKnown RBP16.29■□□□□ 0.2
PRKCH-207ENST00000553831 CHMP4BP1P59074 171 aa16.29■□□□□ 0.2
PRKCH-207ENST00000553831 NFRKBQ6P4R8 1299 aa16.29■□□□□ 0.2
PRKCH-207ENST00000553831 NLRX1Q86UT6 975 aa16.29■□□□□ 0.2
PRKCH-207ENST00000553831 GPRASP2Q96D09 838 aa16.29■□□□□ 0.2
PRKCH-207ENST00000553831 ANO3Q9BYT9 981 aa16.29■□□□□ 0.2
PRKCH-207ENST00000553831 GLT8D2Q9H1C3 349 aa16.29■□□□□ 0.2
PRKCH-207ENST00000553831 TMEM260Q9NX78 707 aa16.29■□□□□ 0.2
PRKCH-207ENST00000553831 UBIAD1Q9Y5Z9 338 aa16.29■□□□□ 0.2
PRKCH-207ENST00000553831 MYH7BA7E2Y1 1941 aa16.29■□□□□ 0.2
PRKCH-207ENST00000553831 UMODL1Q5DID0 1318 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 ESYT2A0FGR8 921 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 F2P00734 622 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 FOSP01100 380 aaPredicted RBP16.28■□□□□ 0.2
PRKCH-207ENST00000553831 ITGB5P18084 799 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 EPHB4P54760 987 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 FPGSQ05932 587 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 AP3B2Q13367 1082 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 NEDD9Q14511 834 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 C8orf34Q49A92 452 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 C9orf50Q5SZB4 431 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 MFSD5Q6N075 450 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 METTL7BQ6UX53 244 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 CYFIP1Q7L576 1253 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 CCDC12Q8WUD4 166 aaPredicted RBP16.28■□□□□ 0.2
PRKCH-207ENST00000553831 ZMYND12Q9H0C1 365 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 HIPK3Q9H422 1215 aa16.28■□□□□ 0.2
PRKCH-207ENST00000553831 CPLX1O14810 134 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 ADAMTS3O15072 1205 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 CYP2C18P33260 490 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 PSEN2P49810 448 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 AK2P54819 239 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 PTPN11Q06124 597 aaPredicted RBP16.27■□□□□ 0.2
PRKCH-207ENST00000553831 LRIT3Q3SXY7 679 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 JAKMIP3Q5VZ66 844 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 LRCH3Q96II8 777 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 SENP7Q9BQF6 1050 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 NOC4LQ9BVI4 516 aaKnown RBP16.27■□□□□ 0.2
PRKCH-207ENST00000553831 KATNAL1Q9BW62 490 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 VPS54Q9P1Q0 977 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 TPCN1Q9ULQ1 816 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 TELO2Q9Y4R8 837 aa16.27■□□□□ 0.2
PRKCH-207ENST00000553831 DOCK5Q9H7D0 1870 aa16.27■□□□□ 0.19
PRKCH-207ENST00000553831 NOP56O00567 594 aaKnown RBP16.26■□□□□ 0.19
PRKCH-207ENST00000553831 ATP9AO75110 1047 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 PPFIA4O75335 1185 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 SUPT20HL2P0C7V6 817 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 CYP2C9P11712 490 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 KCNA2P16389 499 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 SREBF1P36956 1147 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 SSRP1Q08945 709 aaKnown RBP16.26■□□□□ 0.19
PRKCH-207ENST00000553831 SCRN1Q12765 414 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 MTMR1Q13613 665 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 MFSD10Q14728 455 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 SHHQ15465 462 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 KIAA0753Q2KHM9 967 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 TRIM22Q8IYM9 498 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms