RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 SCG5P05408 212 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 GTF2A2P52657 109 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 CDSNQ15517 529 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 INF2Q27J81 1249 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 DCP2Q8IU60 420 aaKnown RBP5.04□□□□□ -1.6
LINC00648-201ENST00000553747 TEX2Q8IWB9 1127 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 PPIL6Q8IXY8 311 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 ADAMTS17Q8TE56 1095 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 DPF3Q92784 378 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 DVL3Q92997 716 aaPredicted RBP5.04□□□□□ -1.6
LINC00648-201ENST00000553747 DDX11Q96FC9 970 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 SYT3Q9BQG1 590 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 TRIM55Q9BYV6 548 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 AP5M1Q9H0R1 490 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 INVSQ9Y283 1065 aa5.04□□□□□ -1.6
LINC00648-201ENST00000553747 ZNF536O15090 1300 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 U2SURPO15042 1029 aaKnown RBP5.03□□□□□ -1.6
LINC00648-201ENST00000553747 KLF4O43474 513 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 ATP2B1P20020 1258 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 GFRA1P56159 465 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 PPP2R2AP63151 447 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 CYP4F3Q08477 520 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 RAB33AQ14088 237 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 SF1Q15637 639 aaKnown RBP5.03□□□□□ -1.6
LINC00648-201ENST00000553747 PRSS53Q2L4Q9 553 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 ACBD5Q5T8D3 534 aaPredicted RBP5.03□□□□□ -1.6
LINC00648-201ENST00000553747 CRIP3Q6Q6R5 217 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 CEP68Q76N32 757 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 CKAP2LQ8IYA6 745 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 PLEKHO2Q8TD55 490 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 TMEM169Q96HH4 297 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 CHAMP1Q96JM3 812 aa5.03□□□□□ -1.6
LINC00648-201ENST00000553747 SSBP3Q9BWW4 388 aaPredicted RBP5.03□□□□□ -1.6
LINC00648-201ENST00000553747 TMEFF2Q9UIK5 374 aaPredicted RBP5.03□□□□□ -1.6
LINC00648-201ENST00000553747 A0A1W2PQU0 124 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 IQCA1LA6NCM1 817 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 CYR61O00622 381 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 LTBRP36941 435 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 BCL6P41182 706 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 HSP90AA2PQ14568 343 aaPredicted RBP5.02□□□□□ -1.61
LINC00648-201ENST00000553747 RGL3Q3MIN7 710 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 MROH9Q5TGP6 573 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 TTLL7Q6ZT98 887 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 CCDC103Q8IW40 242 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 TMEM145Q8NBT3 493 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 KREMEN2Q8NCW0 462 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 SREK1Q8WXA9 508 aaKnown RBP5.02□□□□□ -1.61
LINC00648-201ENST00000553747 KCTD13Q8WZ19 329 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 TRMT2BQ96GJ1 504 aaKnown RBP5.02□□□□□ -1.61
LINC00648-201ENST00000553747 ZNF747Q9BV97 191 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 TANGO6Q9C0B7 1094 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 COA3Q9Y2R0 106 aaPredicted RBP5.02□□□□□ -1.61
LINC00648-201ENST00000553747 SIT1Q9Y3P8 196 aa5.02□□□□□ -1.61
LINC00648-201ENST00000553747 AMHP03971 560 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 FPR2P25090 351 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 SF3A1Q15459 793 aaKnown RBP5.01□□□□□ -1.61
LINC00648-201ENST00000553747 NBPF6Q5VWK0 638 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 RCBTB1Q8NDN9 531 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 CPA5Q8WXQ8 436 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 SEC14L1Q92503 715 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 KISS1RQ969F8 398 aaPredicted RBP5.01□□□□□ -1.61
LINC00648-201ENST00000553747 ARMC5Q96C12 935 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 SGSM3Q96HU1 749 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 NBPF4Q96M43 638 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 IER2Q9BTL4 223 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 VPS11Q9H270 941 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 USP35Q9P2H5 1018 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 ING1Q9UK53 422 aaPredicted RBP5.01□□□□□ -1.61
LINC00648-201ENST00000553747 PCDHA2Q9Y5H9 948 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 HS3ST3A1Q9Y663 406 aa5.01□□□□□ -1.61
LINC00648-201ENST00000553747 ARNTLO00327 626 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 SMARCA5O60264 1052 aaPredicted RBP5□□□□□ -1.61
LINC00648-201ENST00000553747 GRIA2P42262 883 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 SLC6A11P48066 632 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 CACNB2Q08289 660 aaPredicted RBP5□□□□□ -1.61
LINC00648-201ENST00000553747 MAP4K2Q12851 820 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 KLF10Q13118 480 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 LSAMPQ13449 338 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 TESK1Q15569 626 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 SLC35F1Q5T1Q4 408 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 MCTP2Q6DN12 878 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 GLB1LQ6UWU2 654 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 MILR1Q7Z6M3 343 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 RIOX2Q8IUF8 465 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 PALM2Q8IXS6 379 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 ST13P5Q8NFI4 369 aaPredicted RBP5□□□□□ -1.61
LINC00648-201ENST00000553747 HIRIP3Q9BW71 556 aaPredicted RBP5□□□□□ -1.61
LINC00648-201ENST00000553747 PCED1AQ9H1Q7 454 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 X6R8D5 127 aa5□□□□□ -1.61
LINC00648-201ENST00000553747 H7BY64 318 aa4.99□□□□□ -1.61
LINC00648-201ENST00000553747 SGSM2O43147 1006 aa4.99□□□□□ -1.61
LINC00648-201ENST00000553747 FZD7O75084 574 aa4.99□□□□□ -1.61
LINC00648-201ENST00000553747 LCP1P13796 627 aa4.99□□□□□ -1.61
LINC00648-201ENST00000553747 ICAM4Q14773 271 aa4.99□□□□□ -1.61
LINC00648-201ENST00000553747 CHRNA2Q15822 529 aa4.99□□□□□ -1.61
LINC00648-201ENST00000553747 SOGA3Q5TF21 947 aa4.99□□□□□ -1.61
LINC00648-201ENST00000553747 DENND5AQ6IQ26 1287 aa4.99□□□□□ -1.61
LINC00648-201ENST00000553747 ETV3LQ6ZN32 361 aa4.99□□□□□ -1.61
LINC00648-201ENST00000553747 STK32CQ86UX6 486 aa4.99□□□□□ -1.61
LINC00648-201ENST00000553747 ZC3H18Q86VM9 953 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms