RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 GOLGA8AA7E2F4 631 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 GOLGA8BA8MQT2 603 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 EPB41L2O43491 1005 aaKnown RBP14.9□□□□□ -0.02
ACTN1-207ENST00000553290 F2P00734 622 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 UBA1P22314 1058 aaKnown RBP14.9□□□□□ -0.02
ACTN1-207ENST00000553290 SP2Q02086 613 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 BFSP2Q13515 415 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 NEDD9Q14511 834 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 ERICH6BQ5W0A0 696 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 HEATR3Q7Z4Q2 680 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 TEX2Q8IWB9 1127 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 HERVK_113Q902F9 699 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 ZFP91Q96JP5 570 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-207ENST00000553290 JAKMIP1Q96N16 626 aaKnown RBP14.9□□□□□ -0.02
ACTN1-207ENST00000553290 STXBP5LQ9Y2K9 1186 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 SNX14Q9Y5W7 946 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 CNTNAP5Q8WYK1 1306 aa14.9□□□□□ -0.02
ACTN1-207ENST00000553290 TMEM265A0A087WTH1 108 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 SPATA31C2B4DYI2 1134 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 FIBPO43427 364 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 PFKMP08237 780 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 PSMA5P28066 241 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 PSEN2P49810 448 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 MFSD10Q14728 455 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 PTGISQ16647 500 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 HSDL1Q3SXM5 330 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 BLOC1S2Q6QNY1 142 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 CCDC155Q8N6L0 562 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 C7orf31Q8N865 590 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 RETREG2Q8NC44 543 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 PPP1R13LQ8WUF5 828 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 GPKOWQ92917 476 aaPredicted RBP eCLIP14.89□□□□□ -0.03
ACTN1-207ENST00000553290 SCLYQ96I15 445 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 SEMA6BQ9H3T3 888 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 PPP4R2Q9NY27 417 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 RTEL1Q9NZ71 1219 aa14.89□□□□□ -0.03
ACTN1-207ENST00000553290 CCDC196A0A1B0GTZ2 297 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 SPDYE3A6NKU9 549 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 hCG_1984214I3L0E3 225 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 HAS3O00219 553 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 ZNF286BP0CG31 522 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 RFC2P35250 354 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 FUT2Q10981 343 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 KIAA0753Q2KHM9 967 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 GDF6Q6KF10 455 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-207ENST00000553290 PPP1R18Q6NYC8 613 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 METTL7BQ6UX53 244 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 Q6ZUG5 572 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 NLRX1Q86UT6 975 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 FBXL16Q8N461 479 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 ZNF713Q8N859 430 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-207ENST00000553290 CAGE1Q8TC20 777 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 FAM161BQ96MY7 647 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 SENP7Q9BQF6 1050 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 ALG1Q9BT22 464 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 EHMT1Q9H9B1 1298 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 HDAC6Q9UBN7 1215 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 GTF2IRD1Q9UHL9 959 aa14.88□□□□□ -0.03
ACTN1-207ENST00000553290 NAP1L2Q9ULW6 460 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-207ENST00000553290 NOP56O00567 594 aaKnown RBP14.87□□□□□ -0.03
ACTN1-207ENST00000553290 SORBS3O60504 671 aa14.87□□□□□ -0.03
ACTN1-207ENST00000553290 CPA1P15085 419 aa14.87□□□□□ -0.03
ACTN1-207ENST00000553290 DNAJB2P25686 324 aa14.87□□□□□ -0.03
ACTN1-207ENST00000553290 METAP2P50579 478 aaKnown RBP eCLIP14.87□□□□□ -0.031e-7■■■■■ 29
ACTN1-207ENST00000553290 NAPAP54920 295 aa14.87□□□□□ -0.03
ACTN1-207ENST00000553290 UBE2SQ16763 222 aa14.87□□□□□ -0.03
ACTN1-207ENST00000553290 WWC2Q6AWC2 1192 aa14.87□□□□□ -0.03
ACTN1-207ENST00000553290 CYFIP1Q7L576 1253 aa14.87□□□□□ -0.03
ACTN1-207ENST00000553290 GIMAP8Q8ND71 665 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-207ENST00000553290 BRF1Q92994 677 aa14.87□□□□□ -0.03
ACTN1-207ENST00000553290 GPRASP2Q96D09 838 aa14.87□□□□□ -0.03
ACTN1-207ENST00000553290 CDHR1Q96JP9 859 aa14.87□□□□□ -0.03
ACTN1-207ENST00000553290 GUCD1Q96NT3 240 aa14.87□□□□□ -0.03
ACTN1-207ENST00000553290 FAM217BQ9NTX9 383 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-207ENST00000553290 V9GY48 417 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-207ENST00000553290 IQCF3P0C7M6 154 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 RPS6KB1P23443 525 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 CDC27P30260 824 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 APOBRQ0VD83 1088 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 SEMA3FQ13275 785 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 OTOP2Q7RTS6 562 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 AFAP1L1Q8TED9 768 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 C16orf70Q9BSU1 422 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 USP26Q9BXU7 913 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 AGXT2Q9BYV1 514 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 GLT8D2Q9H1C3 349 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 TTYH1Q9H313 450 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-207ENST00000553290 RIC8AQ9NPQ8 531 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 CXXC1Q9P0U4 656 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-207ENST00000553290 PCDHA6Q9UN73 950 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 PCDHA8Q9Y5H6 950 aa14.86□□□□□ -0.03
ACTN1-207ENST00000553290 TRIP12Q14669 1992 aaPredicted RBP14.85□□□□□ -0.03
ACTN1-207ENST00000553290 TANC1Q9C0D5 1861 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 H3BRB1 525 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 MAFGO15525 162 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 PARNO95453 639 aaKnown RBP14.85□□□□□ -0.03
ACTN1-207ENST00000553290 FOSP01100 380 aaPredicted RBP14.85□□□□□ -0.03
ACTN1-207ENST00000553290 LGALS2P05162 132 aa14.85□□□□□ -0.03
ACTN1-207ENST00000553290 ACTN1P12814 892 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms