RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 CCDC40Q4G0X9 1142 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 GLE1Q53GS7 698 aaKnown RBP12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 CEP85LQ5SZL2 805 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 APOBEC3HQ6NTF7 200 aaKnown RBP12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 CDC42EP5Q6NZY7 148 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 PDXDC2PQ6P474 469 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 KDM7AQ6ZMT4 941 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 CPLX3Q8WVH0 158 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 MMS19Q96T76 1030 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 PYM1Q9BRP8 204 aaKnown RBP12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 TSGA10Q9BZW7 698 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 SERPINA10Q9UK55 444 aa12.2□□□□□ -0.46
TUBA1C-209ENST00000552448 USP17L5A8MUK1 530 aa12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 ZBTB7AO95365 584 aa12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 PDHBP11177 359 aa12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 AKR1B1P15121 316 aa12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 CRKP46108 304 aa12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 FXR1P51114 621 aaKnown RBP eCLIP12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 NAP1L1P55209 391 aaKnown RBP12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 ERVK-24P63145 666 aa12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 CUL4BQ13620 913 aa12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 ZKSCAN8Q15776 578 aaPredicted RBP12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 INF2Q27J81 1249 aa12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 TRMT44Q8IYL2 757 aaKnown RBP12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 JAKMIP2Q96AA8 810 aa12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 RRP36Q96EU6 259 aaKnown RBP12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 NUP88Q99567 741 aaPredicted RBP12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 RIOX1Q9H6W3 641 aa12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 FER1L6Q2WGJ9 1857 aa12.19□□□□□ -0.46
TUBA1C-209ENST00000552448 NPM3O75607 178 aaKnown RBP12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 IPO7O95373 1038 aaKnown RBP12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 SNHG28P0DPA3 235 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 NAPAP54920 295 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 SLC8A3P57103 927 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 SNCBQ16143 134 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 NBPF20Q3BBV1 942 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 ARMC9Q7Z3E5 817 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 ARFGAP2Q8N6H7 521 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 OR8K1Q8NGG5 319 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 N4BP2L2Q92802 583 aaPredicted RBP12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 PIGSQ96S52 555 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 MTRQ99707 1265 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 TMEM60Q9H2L4 133 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 BATF3Q9NR55 127 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 KCNQ5Q9NR82 932 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 SWAP70Q9UH65 585 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 SERPINB13Q9UIV8 391 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 CD2APQ9Y5K6 639 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 SMCO2A6NFE2 343 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 N4BP3O15049 544 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 SHMT1P34896 483 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 CYLC1P35663 651 aaPredicted RBP12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 NBPF9Q3BBW0 867 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 C11orf91Q3C1V1 193 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 HSP90AA4PQ58FG1 418 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 DTHD1Q6ZMT9 781 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 SND1Q7KZF4 910 aaKnown RBP eCLIP12.18□□□□□ -0.468e-12■■■■■ 35.6
TUBA1C-209ENST00000552448 CD302Q8IX05 232 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 CCDC170Q8IYT3 715 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 CCDC155Q8N6L0 562 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 RIN2Q8WYP3 895 aaPredicted RBP12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 STAMQ92783 540 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 SLF1Q9BQI6 1058 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 UBA5Q9GZZ9 404 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 ZNHIT6Q9NWK9 470 aaKnown RBP12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 GUCA1BQ9UMX6 200 aa12.18□□□□□ -0.46
TUBA1C-209ENST00000552448 A0A1W2PQC6 194 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 PPP1R3GB7ZBB8 358 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 LAD1O00515 517 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 GNA11P29992 359 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 KRT9P35527 623 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 NFIAQ12857 509 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 SLMAPQ14BN4 828 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 SKIDA1Q1XH10 827 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 CCDC122Q5T0U0 273 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 KRT25Q7Z3Z0 450 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 LRRC47Q8N1G4 583 aaKnown RBP12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 IQCDQ96DY2 449 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 TRIM6Q9C030 488 aaPredicted RBP12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 ATP6V0A4Q9HBG4 840 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 VAT1LQ9HCJ6 419 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 C6orf50Q9HD87 102 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 SEC63Q9UGP8 760 aaKnown RBP12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 RWDD2AQ9UIY3 292 aa12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
TUBA1C-209ENST00000552448 A0A0U1RQJ8 604 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 ESYT2A0FGR8 921 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 MYO1FO00160 1098 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 TTLL1O95922 423 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 HLA-DOAP06340 250 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 CDC25AP30304 524 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 PRPHP41219 470 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 ASPRV1Q53RT3 343 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 PPP4R3AQ6IN85 833 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 CLEC10AQ8IUN9 316 aa12.16□□□□□ -0.46
TUBA1C-209ENST00000552448 KIAA0825Q8IV33 1275 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms