RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-208ENST00000551855 IFNGR1P15260 489 aa4.31□□□□□ -1.72
CPNE8-208ENST00000551855 TACR2P21452 398 aa4.31□□□□□ -1.72
CPNE8-208ENST00000551855 CDKN1CP49918 316 aaPredicted RBP4.31□□□□□ -1.72
CPNE8-208ENST00000551855 ZNF445P59923 1031 aa4.31□□□□□ -1.72
CPNE8-208ENST00000551855 FAM209AQ5JX71 171 aa4.31□□□□□ -1.72
CPNE8-208ENST00000551855 DCAF15Q66K64 600 aa4.31□□□□□ -1.72
CPNE8-208ENST00000551855 DDX11Q96FC9 970 aa4.31□□□□□ -1.72
CPNE8-208ENST00000551855 FGD4Q96M96 766 aa4.31□□□□□ -1.72
CPNE8-208ENST00000551855 FEZ1Q99689 392 aa4.31□□□□□ -1.72
CPNE8-208ENST00000551855 DDX56Q9NY93 547 aaKnown RBP4.31□□□□□ -1.72
CPNE8-208ENST00000551855 INVSQ9Y283 1065 aa4.31□□□□□ -1.72
CPNE8-208ENST00000551855 A0A1W2PQU0 124 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 TBX1O43435 398 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 GRIA2P42262 883 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 GDF5P43026 501 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 CACNB2Q08289 660 aaPredicted RBP4.3□□□□□ -1.72
CPNE8-208ENST00000551855 FAM50AQ14320 339 aaKnown RBP4.3□□□□□ -1.72
CPNE8-208ENST00000551855 LRRFIP1Q32MZ4 808 aaKnown RBP4.3□□□□□ -1.72
CPNE8-208ENST00000551855 RGL3Q3MIN7 710 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 SV2CQ496J9 727 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 CWF19L1Q69YN2 538 aaKnown RBP4.3□□□□□ -1.72
CPNE8-208ENST00000551855 CRIP3Q6Q6R5 217 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 CYP2R1Q6VVX0 501 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 TTLL7Q6ZT98 887 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 NOL8Q76FK4 1167 aaKnown RBP4.3□□□□□ -1.72
CPNE8-208ENST00000551855 CCDC144CPQ8IYA2 1237 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 CHST13Q8NET6 341 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 ST13P5Q8NFI4 369 aaPredicted RBP4.3□□□□□ -1.72
CPNE8-208ENST00000551855 NLGN2Q8NFZ4 835 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 ZCRB1Q8TBF4 217 aaKnown RBP4.3□□□□□ -1.72
CPNE8-208ENST00000551855 DVL3Q92997 716 aaPredicted RBP4.3□□□□□ -1.72
CPNE8-208ENST00000551855 PTCHD1Q96NR3 888 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 SUCOQ9UBS9 1254 aaKnown RBP4.3□□□□□ -1.72
CPNE8-208ENST00000551855 APEX2Q9UBZ4 518 aa4.3□□□□□ -1.72
CPNE8-208ENST00000551855 MYCLP1P12525 358 aaPredicted RBP4.29□□□□□ -1.72
CPNE8-208ENST00000551855 SDSP20132 328 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 CORO7P57737 925 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 SLC7A5Q01650 507 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 PABPC4Q13310 644 aaKnown RBP eCLIP4.29□□□□□ -1.72
CPNE8-208ENST00000551855 TCEA2Q15560 299 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 CRB2Q5IJ48 1285 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 AXDND1Q5T1B0 1012 aaPredicted RBP4.29□□□□□ -1.72
CPNE8-208ENST00000551855 INTS3Q68E01 1043 aaKnown RBP4.29□□□□□ -1.72
CPNE8-208ENST00000551855 EEPD1Q7L9B9 569 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 THNSL2Q86YJ6 484 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 ZBTB38Q8NAP3 1195 aaPredicted RBP4.29□□□□□ -1.72
CPNE8-208ENST00000551855 PPP1R14AQ96A00 147 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 TSPAN17Q96FV3 270 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 IER2Q9BTL4 223 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 BRINP2Q9C0B6 783 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 ARHGEF4Q9NR80 690 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 ZNF214Q9UL59 606 aaPredicted RBP4.29□□□□□ -1.72
CPNE8-208ENST00000551855 RWDD3Q9Y3V2 267 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 PRKAB1Q9Y478 270 aa4.29□□□□□ -1.72
CPNE8-208ENST00000551855 A0A087X0B3 334 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 BLACEA4D250 179 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 CYR61O00622 381 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 EPHX1P07099 455 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 CD3EP07766 207 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 CNGA1P29973 690 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 ICAM4Q14773 271 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 NOL9Q5SY16 702 aaKnown RBP4.28□□□□□ -1.72
CPNE8-208ENST00000551855 STRA8Q7Z7C7 330 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 STK32CQ86UX6 486 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 FIBCD1Q8N539 461 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 TAB3Q8N5C8 712 aaPredicted RBP4.28□□□□□ -1.72
CPNE8-208ENST00000551855 LINC00482Q8N8I6 264 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 PRPF38AQ8NAV1 312 aaKnown RBP4.28□□□□□ -1.72
CPNE8-208ENST00000551855 CPA5Q8WXQ8 436 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 KISS1RQ969F8 398 aaPredicted RBP4.28□□□□□ -1.72
CPNE8-208ENST00000551855 GORASP1Q9BQQ3 440 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 MCMBPQ9BTE3 642 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 ZNF747Q9BV97 191 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 PHAXQ9H814 394 aaKnown RBP4.28□□□□□ -1.72
CPNE8-208ENST00000551855 GP6Q9HCN6 339 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 SLC52A1Q9NWF4 448 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 SIT1Q9Y3P8 196 aa4.28□□□□□ -1.72
CPNE8-208ENST00000551855 ZNF536O15090 1300 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 CBFA2T2O43439 604 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 TBC1D8O95759 1140 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 AMHP03971 560 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 ITGAVP06756 1048 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 C8BP07358 591 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 PDGFRBP09619 1106 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 NOP2P46087 812 aaKnown RBP4.27□□□□□ -1.73
CPNE8-208ENST00000551855 PPP2R2AP63151 447 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 NCAPHQ15003 741 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 SF1Q15637 639 aaKnown RBP4.27□□□□□ -1.73
CPNE8-208ENST00000551855 TM4SF20Q53R12 229 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 MCTP2Q6DN12 878 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 CNNM4Q6P4Q7 775 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 DDX42Q86XP3 938 aaKnown RBP eCLIP4.27□□□□□ -1.73
CPNE8-208ENST00000551855 NIM1KQ8IY84 436 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 ZNF513Q8N8E2 541 aaPredicted RBP4.27□□□□□ -1.73
CPNE8-208ENST00000551855 ZSWIM2Q8NEG5 633 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 ADCY4Q8NFM4 1077 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 SLITRK6Q9H5Y7 841 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 NOL6Q9H6R4 1146 aaKnown RBP4.27□□□□□ -1.73
CPNE8-208ENST00000551855 PPP4R1LQ9P1A2 415 aa4.27□□□□□ -1.73
CPNE8-208ENST00000551855 CHPF2Q9P2E5 772 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms