RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 CLK2P49760 499 aaKnown RBP17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 CDK7P50613 346 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 NEK4P51957 841 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 SSRP1Q08945 709 aaKnown RBP17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 SCRN1Q12765 414 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 STK3Q13188 491 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 FAM177A1Q8N128 213 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 SLC43A3Q8NBI5 491 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 AFG1LQ8WV93 481 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 VTI1AQ96AJ9 217 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 CDHR1Q96JP9 859 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 LBHD1Q9BQE6 289 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 MTG1Q9BT17 334 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 ANO3Q9BYT9 981 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 C6orf50Q9HD87 102 aa17.66■□□□□ 0.42
PRPF40B-211ENST00000551063 DCDC2CA8MYV0 355 aa17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 SPATA31C2B4DYI2 1134 aa17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 PQBP1O60828 265 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 MYL3P08590 195 aa17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 CLTBP09497 229 aa17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 CELF3Q5SZQ8 465 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 DHX37Q8IY37 1157 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 PPTC7Q8NI37 304 aa17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 GPRASP2Q96D09 838 aa17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 ZFP91Q96JP5 570 aaPredicted RBP17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 SH3GLB2Q9NR46 395 aa17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 STK36Q9NRP7 1315 aa17.65■□□□□ 0.42
PRPF40B-211ENST00000551063 PPFIA3O75145 1194 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 GGPS1O95749 300 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 HOXD8P13378 290 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 SREBF1P36956 1147 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 RBM25P49756 843 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 MDM2Q00987 491 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 SEMA3FQ13275 785 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 ITGA7Q13683 1181 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 NEDD9Q14511 834 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 MYSM1Q5VVJ2 828 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 FAM126BQ8IXS8 530 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 REXO1Q8N1G1 1221 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 BICD2Q8TD16 824 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 SENP7Q9BQF6 1050 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 C22orf23Q9BZE7 217 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 PRDM5Q9NQX1 630 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 RTEL1Q9NZ71 1219 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 UBIAD1Q9Y5Z9 338 aa17.64■□□□□ 0.41
PRPF40B-211ENST00000551063 KIAA0355O15063 1070 aa17.63■□□□□ 0.41
PRPF40B-211ENST00000551063 TLR3O15455 904 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-211ENST00000551063 DGKDQ16760 1214 aa17.63■□□□□ 0.41
PRPF40B-211ENST00000551063 GTF3C6Q969F1 213 aa17.63■□□□□ 0.41
PRPF40B-211ENST00000551063 SPATA33Q96N06 139 aa17.63■□□□□ 0.41
PRPF40B-211ENST00000551063 UPF2Q9HAU5 1272 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-211ENST00000551063 VPS54Q9P1Q0 977 aa17.63■□□□□ 0.41
PRPF40B-211ENST00000551063 GRIN2DO15399 1336 aa17.63■□□□□ 0.41
PRPF40B-211ENST00000551063 MAFGO15525 162 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 ITGB5P18084 799 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 PSMC6P62333 389 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 SP2Q02086 613 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 FAAP100Q0VG06 881 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 ME3Q16798 604 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 METTL7BQ6UX53 244 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 GIMAP8Q8ND71 665 aaPredicted RBP17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 PGBD1Q96JS3 809 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 KIF2CQ99661 725 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 MLXIPQ9HAP2 919 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 JADE2Q9NQC1 790 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 TMEM260Q9NX78 707 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 TBX21Q9UL17 535 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 KIAA1217Q5T5P2 1943 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 SZT2Q5T011 3432 aa17.62■□□□□ 0.41
PRPF40B-211ENST00000551063 PPFIA4O75335 1185 aa17.61■□□□□ 0.41
PRPF40B-211ENST00000551063 CD4P01730 458 aa17.61■□□□□ 0.41
PRPF40B-211ENST00000551063 PTPN11Q06124 597 aaPredicted RBP17.61■□□□□ 0.41
PRPF40B-211ENST00000551063 MTMR1Q13613 665 aa17.61■□□□□ 0.41
PRPF40B-211ENST00000551063 HSDL1Q3SXM5 330 aa17.61■□□□□ 0.41
PRPF40B-211ENST00000551063 JAKMIP3Q5VZ66 844 aa17.61■□□□□ 0.41
PRPF40B-211ENST00000551063 NFRKBQ6P4R8 1299 aa17.61■□□□□ 0.41
PRPF40B-211ENST00000551063 MXRA8Q9BRK3 442 aa17.61■□□□□ 0.41
PRPF40B-211ENST00000551063 KATNAL1Q9BW62 490 aa17.61■□□□□ 0.41
PRPF40B-211ENST00000551063 TMEM39AQ9NV64 488 aa17.61■□□□□ 0.41
PRPF40B-211ENST00000551063 TRIM43BA6NCK2 446 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 LARGE1O95461 756 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 F2P00734 622 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 NLRP5P59047 1200 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 ARHGAP4P98171 946 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 CEP55Q53EZ4 464 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 GALNT17Q6IS24 598 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 SH3RF1Q7Z6J0 888 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 DEFB123Q8N688 67 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 DAGLBQ8NCG7 672 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 IL27Q8NEV9 243 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 CRYGNQ8WXF5 182 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 TRIM43Q96BQ3 446 aaPredicted RBP17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 SCN10AQ9Y5Y9 1956 aa17.6■□□□□ 0.41
PRPF40B-211ENST00000551063 NOP56O00567 594 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 CTDNEP1O95476 244 aa17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 CYP3A4P08684 503 aa17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 KCNA2P16389 499 aa17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 RABEP1Q15276 862 aa17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 NBPF20Q3BBV1 942 aa17.59■□□□□ 0.41
PRPF40B-211ENST00000551063 CYFIP1Q7L576 1253 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms