RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 UQCRHP07919 91 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 UBXN2AP68543 259 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 SPP2Q13103 211 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 KIF2AO00139 706 aaPredicted RBP17.3■□□□□ 0.36
SCN8A-206ENST00000550891 ALAS1P13196 640 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 LMNB1P20700 586 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 KCNJ6P48051 423 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 HYIQ5T013 277 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 HPS3Q969F9 1004 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 AGBL1Q96MI9 1066 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 SPON1Q9HCB6 807 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 PANK4Q9NVE7 773 aa17.3■□□□□ 0.36
SCN8A-206ENST00000550891 BRCA1P38398 1863 aaKnown RBP17.3■□□□□ 0.36
SCN8A-206ENST00000550891 ZBED4O75132 1171 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 MTIF2P46199 727 aaKnown RBP17.29■□□□□ 0.36
SCN8A-206ENST00000550891 PMS1P54277 932 aaKnown RBP17.29■□□□□ 0.36
SCN8A-206ENST00000550891 TBX2Q13207 712 aaPredicted RBP17.29■□□□□ 0.36
SCN8A-206ENST00000550891 LRCH2Q5VUJ6 765 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 TTI2Q6NXR4 508 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 SCYL3Q8IZE3 742 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 PNMA2Q9UL42 364 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 RABGAP1Q9Y3P9 1069 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 KIF20AO95235 890 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 ECM1Q16610 540 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 CEP135Q66GS9 1140 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 APTXQ7Z2E3 356 aaKnown RBP17.29■□□□□ 0.36
SCN8A-206ENST00000550891 CNGA4Q8IV77 575 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 CYP2W1Q8TAV3 490 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 HOMER2Q9NSB8 354 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 GGA3Q9NZ52 723 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 POTEFA5A3E0 1075 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 LRRC10BA6NIK2 292 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 ZSCAN12O43309 604 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 POTEIP0CG38 1075 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 POTEGQ6S5H5 508 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 POTEEQ6S8J3 1075 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 GPC2Q8N158 579 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 GPRC5DQ9NZD1 345 aa17.29■□□□□ 0.36
SCN8A-206ENST00000550891 USP27XA6NNY8 438 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 STX10O60499 249 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 GAS7O60861 476 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 MED24O75448 989 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 RPA1P27694 616 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 TRIM14Q14142 442 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 FAM26FQ5R3K3 315 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 PRAMEF18Q5VWM3 479 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 ANKRD40Q6AI12 368 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 GUF1Q8N442 669 aaKnown RBP17.28■□□□□ 0.36
SCN8A-206ENST00000550891 KIAA0895Q8NCT3 520 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 LENG9Q96B70 501 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 PRELPP51888 382 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 CYP4A11Q02928 519 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 CEP55Q53EZ4 464 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 HERC4Q5GLZ8 1057 aaPredicted RBP17.28■□□□□ 0.36
SCN8A-206ENST00000550891 UPF1Q92900 1129 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCN8A-206ENST00000550891 EEF2KMTQ96G04 330 aa17.28■□□□□ 0.36
SCN8A-206ENST00000550891 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
SCN8A-206ENST00000550891 CHMP2AO43633 222 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 VCAM1P19320 739 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 SETQ01105 290 aaPredicted RBP17.27■□□□□ 0.36
SCN8A-206ENST00000550891 COASYQ13057 564 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 CATSPER3Q86XQ3 398 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 PCMTD1Q96MG8 357 aaPredicted RBP17.27■□□□□ 0.36
SCN8A-206ENST00000550891 RAVER2Q9HCJ3 691 aaKnown RBP17.27■□□□□ 0.36
SCN8A-206ENST00000550891 RBL2Q08999 1139 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 RAD51AP2Q09MP3 1159 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 TSR1Q2NL82 804 aaKnown RBP17.27■□□□□ 0.36
SCN8A-206ENST00000550891 SUPT20HL1Q3ZLR7 823 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 KRT26Q7Z3Y9 468 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 TC2NQ8N9U0 490 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 PAXBP1Q9Y5B6 917 aa17.27■□□□□ 0.36
SCN8A-206ENST00000550891 ITIH6Q6UXX5 1313 aa17.27■□□□□ 0.35
SCN8A-206ENST00000550891 MEIS1O00470 390 aa17.27■□□□□ 0.35
SCN8A-206ENST00000550891 PABPC4Q13310 644 aaKnown RBP eCLIP17.27■□□□□ 0.35
SCN8A-206ENST00000550891 E4F1Q66K89 784 aaPredicted RBP17.27■□□□□ 0.35
SCN8A-206ENST00000550891 ZNF280CQ8ND82 737 aa17.27■□□□□ 0.35
SCN8A-206ENST00000550891 TRPM4Q8TD43 1214 aa17.27■□□□□ 0.35
SCN8A-206ENST00000550891 ZKSCAN4Q969J2 545 aaPredicted RBP17.27■□□□□ 0.35
SCN8A-206ENST00000550891 CNOT6LQ96LI5 555 aaKnown RBP17.27■□□□□ 0.35
SCN8A-206ENST00000550891 TUBGCP2Q9BSJ2 902 aa17.27■□□□□ 0.35
SCN8A-206ENST00000550891 ZNF577Q9BSK1 485 aa17.27■□□□□ 0.35
SCN8A-206ENST00000550891 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.27■□□□□ 0.35
SCN8A-206ENST00000550891 FDX1P10109 184 aa17.26■□□□□ 0.35
SCN8A-206ENST00000550891 PPP1R9AQ9ULJ8 1098 aa17.26■□□□□ 0.35
SCN8A-206ENST00000550891 BACE1P56817 501 aa17.26■□□□□ 0.35
SCN8A-206ENST00000550891 LRRC63Q05C16 580 aa17.26■□□□□ 0.35
SCN8A-206ENST00000550891 FKBP15Q5T1M5 1219 aa17.26■□□□□ 0.35
SCN8A-206ENST00000550891 PANX2Q96RD6 677 aa17.26■□□□□ 0.35
SCN8A-206ENST00000550891 WDR11Q9BZH6 1224 aa17.26■□□□□ 0.35
SCN8A-206ENST00000550891 ZHX2Q9Y6X8 837 aa17.26■□□□□ 0.35
SCN8A-206ENST00000550891 LGALS16A8MUM7 142 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 DNM2P50570 870 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 SPIRE1Q08AE8 756 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 CCDC51Q96ER9 411 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 PPP1R13BQ96KQ4 1090 aa17.25■□□□□ 0.35
SCN8A-206ENST00000550891 EIF2AK1Q9BQI3 630 aaKnown RBP17.25■□□□□ 0.35
SCN8A-206ENST00000550891 NOC4LQ9BVI4 516 aaKnown RBP17.25■□□□□ 0.35
SCN8A-206ENST00000550891 NAA15Q9BXJ9 866 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms