RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 NFIBO00712 420 aa23.39■■□□□ 1.34
PRDM4-205ENST00000550376 CNNM4Q6P4Q7 775 aa23.39■■□□□ 1.34
PRDM4-205ENST00000550376 SLFN12Q8IYM2 578 aa23.39■■□□□ 1.34
PRDM4-205ENST00000550376 NAP1L4Q99733 375 aaKnown RBP23.39■■□□□ 1.34
PRDM4-205ENST00000550376 DESI2Q9BSY9 194 aa23.39■■□□□ 1.34
PRDM4-205ENST00000550376 ZNF536O15090 1300 aa23.39■■□□□ 1.33
PRDM4-205ENST00000550376 PIK3CDO00329 1044 aa23.39■■□□□ 1.33
PRDM4-205ENST00000550376 PABPC4Q13310 644 aaKnown RBP eCLIP23.39■■□□□ 1.33
PRDM4-205ENST00000550376 TOGARAM2Q6ZUX3 1019 aa23.39■■□□□ 1.33
PRDM4-205ENST00000550376 NYAP1Q6ZVC0 841 aa23.39■■□□□ 1.33
PRDM4-205ENST00000550376 PPFIBP1Q86W92 1011 aa23.39■■□□□ 1.33
PRDM4-205ENST00000550376 DHTKD1Q96HY7 919 aaPredicted RBP23.39■■□□□ 1.33
PRDM4-205ENST00000550376 PKD2L1Q9P0L9 805 aa23.39■■□□□ 1.33
PRDM4-205ENST00000550376 GYPCP04921 128 aa23.38■■□□□ 1.33
PRDM4-205ENST00000550376 SPATA31C1P0DKV0 1188 aa23.38■■□□□ 1.33
PRDM4-205ENST00000550376 CCNE1P24864 410 aa23.38■■□□□ 1.33
PRDM4-205ENST00000550376 EPS15P42566 896 aa23.38■■□□□ 1.33
PRDM4-205ENST00000550376 HOOK2Q96ED9 719 aa23.38■■□□□ 1.33
PRDM4-205ENST00000550376 WNK4Q96J92 1243 aa23.38■■□□□ 1.33
PRDM4-205ENST00000550376 IGLV3-22A0A075B6J6 115 aa23.38■■□□□ 1.33
PRDM4-205ENST00000550376 AKR1B15C9JRZ8 316 aaPredicted RBP23.38■■□□□ 1.33
PRDM4-205ENST00000550376 RBM10P98175 930 aaKnown RBP23.38■■□□□ 1.33
PRDM4-205ENST00000550376 GPBP1Q86WP2 473 aa23.38■■□□□ 1.33
PRDM4-205ENST00000550376 SOWAHDA6NJG2 315 aa23.37■■□□□ 1.33
PRDM4-205ENST00000550376 B4DLN1 442 aa23.37■■□□□ 1.33
PRDM4-205ENST00000550376 ZBTB39O15060 712 aa23.37■■□□□ 1.33
PRDM4-205ENST00000550376 NRDCO43847 1150 aa23.37■■□□□ 1.33
PRDM4-205ENST00000550376 FLOT1O75955 427 aa23.37■■□□□ 1.33
PRDM4-205ENST00000550376 FAM160B2Q86V87 743 aa23.37■■□□□ 1.33
PRDM4-205ENST00000550376 EMILIN3Q9NT22 766 aa23.37■■□□□ 1.33
PRDM4-205ENST00000550376 COL20A1Q9P218 1284 aa23.37■■□□□ 1.33
PRDM4-205ENST00000550376 MRPL11Q9Y3B7 192 aaKnown RBP23.37■■□□□ 1.33
PRDM4-205ENST00000550376 ALAS1P13196 640 aa23.37■■□□□ 1.33
PRDM4-205ENST00000550376 ARSHQ5FYA8 562 aa23.37■■□□□ 1.33
PRDM4-205ENST00000550376 PURBQ96QR8 312 aaKnown RBP23.37■■□□□ 1.33
PRDM4-205ENST00000550376 PANK4Q9NVE7 773 aa23.37■■□□□ 1.33
PRDM4-205ENST00000550376 CTNND1O60716 968 aaKnown RBP23.36■■□□□ 1.33
PRDM4-205ENST00000550376 CIITAP33076 1130 aa23.36■■□□□ 1.33
PRDM4-205ENST00000550376 HIRAP54198 1017 aaPredicted RBP23.36■■□□□ 1.33
PRDM4-205ENST00000550376 COASYQ13057 564 aa23.36■■□□□ 1.33
PRDM4-205ENST00000550376 MOXD1Q6UVY6 613 aa23.36■■□□□ 1.33
PRDM4-205ENST00000550376 ANKRD20A12PQ8NF67 263 aa23.36■■□□□ 1.33
PRDM4-205ENST00000550376 MYRIPQ8NFW9 859 aa23.36■■□□□ 1.33
PRDM4-205ENST00000550376 WRNIP1Q96S55 665 aa23.36■■□□□ 1.33
PRDM4-205ENST00000550376 SLF1Q9BQI6 1058 aa23.36■■□□□ 1.33
PRDM4-205ENST00000550376 VAV3Q9UKW4 847 aa23.36■■□□□ 1.33
PRDM4-205ENST00000550376 ARP10275 920 aa23.36■■□□□ 1.33
PRDM4-205ENST00000550376 KLK7P49862 253 aa23.36■■□□□ 1.33
PRDM4-205ENST00000550376 CTTNQ14247 550 aaKnown RBP23.36■■□□□ 1.33
PRDM4-205ENST00000550376 UPF1Q92900 1129 aaKnown RBP eCLIP23.36■■□□□ 1.33
PRDM4-205ENST00000550376 ABCB11O95342 1321 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 PVALEFA0A1B0GWK0 134 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 VCAM1P19320 739 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 MUM1L1Q5H9M0 696 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 PRPF38AQ8NAV1 312 aaKnown RBP23.35■■□□□ 1.33
PRDM4-205ENST00000550376 NT5C3AQ9H0P0 336 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 MAGEC2Q9UBF1 373 aaPredicted RBP23.35■■□□□ 1.33
PRDM4-205ENST00000550376 A0A0U1RQJ8 604 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 CYP11B2P19099 503 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 SPAG1Q07617 926 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 HYIQ5T013 277 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 NELFCDQ8IXH7 590 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 CCDC112Q8NEF3 446 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 PIGOQ8TEQ8 1089 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 ATRIPQ8WXE1 791 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 CNOT6LQ96LI5 555 aaKnown RBP23.35■■□□□ 1.33
PRDM4-205ENST00000550376 PRIMPOLQ96LW4 560 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 TUBGCP2Q9BSJ2 902 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 THAP9Q9H5L6 903 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 GGA3Q9NZ52 723 aa23.35■■□□□ 1.33
PRDM4-205ENST00000550376 IL31RAQ8NI17 732 aa23.34■■□□□ 1.33
PRDM4-205ENST00000550376 RPAP3Q9H6T3 665 aaPredicted RBP23.34■■□□□ 1.33
PRDM4-205ENST00000550376 LTBP3Q9NS15 1303 aa23.34■■□□□ 1.33
PRDM4-205ENST00000550376 KDM3AQ9Y4C1 1321 aa23.34■■□□□ 1.33
PRDM4-205ENST00000550376 DDX39AO00148 427 aaKnown RBP23.34■■□□□ 1.33
PRDM4-205ENST00000550376 KRT18P05783 430 aaKnown RBP23.34■■□□□ 1.33
PRDM4-205ENST00000550376 TPM2P07951 284 aa23.34■■□□□ 1.33
PRDM4-205ENST00000550376 CYP3A4P08684 503 aa23.34■■□□□ 1.33
PRDM4-205ENST00000550376 SYT10Q6XYQ8 523 aa23.34■■□□□ 1.33
PRDM4-205ENST00000550376 KIAA1683Q9H0B3 1180 aa23.34■■□□□ 1.33
PRDM4-205ENST00000550376 ICAM1P05362 532 aa23.33■■□□□ 1.33
PRDM4-205ENST00000550376 TERF1P54274 439 aa23.33■■□□□ 1.33
PRDM4-205ENST00000550376 SLC12A3P55017 1021 aa23.33■■□□□ 1.33
PRDM4-205ENST00000550376 HERC4Q5GLZ8 1057 aaPredicted RBP23.33■■□□□ 1.33
PRDM4-205ENST00000550376 CENPPQ6IPU0 288 aa23.33■■□□□ 1.33
PRDM4-205ENST00000550376 FAM20AQ96MK3 541 aa23.33■■□□□ 1.33
PRDM4-205ENST00000550376 EIF2AK1Q9BQI3 630 aaKnown RBP23.33■■□□□ 1.33
PRDM4-205ENST00000550376 MTIF2P46199 727 aaKnown RBP23.33■■□□□ 1.32
PRDM4-205ENST00000550376 EHHADHQ08426 723 aa23.33■■□□□ 1.32
PRDM4-205ENST00000550376 MB21D1Q8N884 522 aa23.33■■□□□ 1.32
PRDM4-205ENST00000550376 UBE2Q2Q8WVN8 375 aa23.33■■□□□ 1.32
PRDM4-205ENST00000550376 CLEC4DQ8WXI8 215 aa23.33■■□□□ 1.32
PRDM4-205ENST00000550376 ZHX2Q9Y6X8 837 aa23.33■■□□□ 1.32
PRDM4-205ENST00000550376 ARHGAP6O43182 974 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 PLA2G6O60733 806 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 MFAP3LO75121 409 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 LRCH2Q5VUJ6 765 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 TPH2Q8IWU9 490 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 REXO1L1PQ8IX06 675 aa23.32■■□□□ 1.32
PRDM4-205ENST00000550376 BHMT2Q9H2M3 363 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms