RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 OXER1Q8TDS5 423 aa25.72■■□□□ 1.71
BRF1-216ENST00000550208 CRYGNQ8WXF5 182 aa25.72■■□□□ 1.71
BRF1-216ENST00000550208 MXRA8Q9BRK3 442 aa25.72■■□□□ 1.71
BRF1-216ENST00000550208 BCAS3Q9H6U6 928 aa25.72■■□□□ 1.71
BRF1-216ENST00000550208 JADE2Q9NQC1 790 aa25.72■■□□□ 1.71
BRF1-216ENST00000550208 PHF24Q9UPV7 400 aa25.72■■□□□ 1.71
BRF1-216ENST00000550208 SORBS3O60504 671 aa25.71■■□□□ 1.71
BRF1-216ENST00000550208 ACLYP53396 1101 aa25.71■■□□□ 1.71
BRF1-216ENST00000550208 HMGN5P82970 282 aaKnown RBP25.71■■□□□ 1.71
BRF1-216ENST00000550208 PCSK9Q8NBP7 692 aaKnown RBP25.71■■□□□ 1.71
BRF1-216ENST00000550208 FIBPO43427 364 aa25.7■■□□□ 1.7
BRF1-216ENST00000550208 EDIL3O43854 480 aa25.7■■□□□ 1.7
BRF1-216ENST00000550208 ASGR1P07306 291 aa25.7■■□□□ 1.7
BRF1-216ENST00000550208 CYP3A4P08684 503 aa25.7■■□□□ 1.7
BRF1-216ENST00000550208 ZNF76P36508 570 aa25.7■■□□□ 1.7
BRF1-216ENST00000550208 KRT40Q6A162 431 aa25.7■■□□□ 1.7
BRF1-216ENST00000550208 DHX37Q8IY37 1157 aaKnown RBP25.7■■□□□ 1.7
BRF1-216ENST00000550208 GPRASP2Q96D09 838 aa25.7■■□□□ 1.7
BRF1-216ENST00000550208 ATP9AO75110 1047 aa25.69■■□□□ 1.7
BRF1-216ENST00000550208 GGPS1O95749 300 aa25.69■■□□□ 1.7
BRF1-216ENST00000550208 UBA1P22314 1058 aaKnown RBP25.69■■□□□ 1.7
BRF1-216ENST00000550208 GUCY1B3Q02153 619 aa25.69■■□□□ 1.7
BRF1-216ENST00000550208 TRIM29Q14134 588 aa25.69■■□□□ 1.7
BRF1-216ENST00000550208 CEP55Q53EZ4 464 aa25.69■■□□□ 1.7
BRF1-216ENST00000550208 CELF3Q5SZQ8 465 aaKnown RBP25.69■■□□□ 1.7
BRF1-216ENST00000550208 MYSM1Q5VVJ2 828 aa25.69■■□□□ 1.7
BRF1-216ENST00000550208 FAM184AQ8NB25 1140 aa25.69■■□□□ 1.7
BRF1-216ENST00000550208 AFG1LQ8WV93 481 aa25.69■■□□□ 1.7
BRF1-216ENST00000550208 A0A1W2PQ45 241 aaPredicted RBP25.68■■□□□ 1.7
BRF1-216ENST00000550208 A0A1W2PQY0 241 aa25.68■■□□□ 1.7
BRF1-216ENST00000550208 MOXD2PA6NHM9 499 aa25.68■■□□□ 1.7
BRF1-216ENST00000550208 A6NJR5 290 aa25.68■■□□□ 1.7
BRF1-216ENST00000550208 MEIS1O00470 390 aa25.68■■□□□ 1.7
BRF1-216ENST00000550208 ZEB2O60315 1214 aa25.68■■□□□ 1.7
BRF1-216ENST00000550208 ARP10275 920 aa25.68■■□□□ 1.7
BRF1-216ENST00000550208 ATN1P54259 1190 aaPredicted RBP25.68■■□□□ 1.7
BRF1-216ENST00000550208 LAMC2Q13753 1193 aa25.68■■□□□ 1.7
BRF1-216ENST00000550208 TBCKQ8TEA7 893 aa25.68■■□□□ 1.7
BRF1-216ENST00000550208 MYH7BA7E2Y1 1941 aa25.67■■□□□ 1.7
BRF1-216ENST00000550208 FAM86B1E9PN63 330 aa25.67■■□□□ 1.7
BRF1-216ENST00000550208 MMP1P03956 469 aa25.67■■□□□ 1.7
BRF1-216ENST00000550208 FAM86B2P0C5J1 330 aa25.67■■□□□ 1.7
BRF1-216ENST00000550208 KRT2P35908 639 aa25.67■■□□□ 1.7
BRF1-216ENST00000550208 CPT1AP50416 773 aa25.67■■□□□ 1.7
BRF1-216ENST00000550208 MTMR1Q13613 665 aa25.67■■□□□ 1.7
BRF1-216ENST00000550208 KRT25Q7Z3Z0 450 aa25.67■■□□□ 1.7
BRF1-216ENST00000550208 C8orf76Q96K31 380 aa25.67■■□□□ 1.7
BRF1-216ENST00000550208 MLXIPQ9HAP2 919 aa25.67■■□□□ 1.7
BRF1-216ENST00000550208 PKD2L1Q9P0L9 805 aa25.67■■□□□ 1.7
BRF1-216ENST00000550208 MAFGO15525 162 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 MYL3P08590 195 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 USP11P51784 963 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 NR5A1Q13285 461 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 CUL4AQ13619 759 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 NEDD9Q14511 834 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 LRRC26Q2I0M4 334 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 CXCL17Q6UXB2 119 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 SLC39A5Q6ZMH5 540 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 CYFIP1Q7L576 1253 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 EMID1Q96A84 441 aaPredicted RBP25.66■■□□□ 1.7
BRF1-216ENST00000550208 VTI1AQ96AJ9 217 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 CDHR1Q96JP9 859 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 SENP7Q9BQF6 1050 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 HTATIP2Q9BUP3 242 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 KCNH7Q9NS40 1196 aa25.66■■□□□ 1.7
BRF1-216ENST00000550208 CCDC194A0A1B0GVG4 234 aa25.65■■□□□ 1.7
BRF1-216ENST00000550208 BTBD18B2RXH4 712 aa25.65■■□□□ 1.7
BRF1-216ENST00000550208 KCNA2P16389 499 aa25.65■■□□□ 1.7
BRF1-216ENST00000550208 CIITAP33076 1130 aa25.65■■□□□ 1.7
BRF1-216ENST00000550208 NONOQ15233 471 aaKnown RBP eCLIP25.65■■□□□ 1.7
BRF1-216ENST00000550208 BRDTQ58F21 947 aaPredicted RBP25.65■■□□□ 1.7
BRF1-216ENST00000550208 EARS2Q5JPH6 523 aaKnown RBP25.65■■□□□ 1.7
BRF1-216ENST00000550208 PLA2G4DQ86XP0 818 aa25.65■■□□□ 1.7
BRF1-216ENST00000550208 DPF3Q92784 378 aa25.65■■□□□ 1.7
BRF1-216ENST00000550208 TNFRSF25Q93038 417 aa25.65■■□□□ 1.7
BRF1-216ENST00000550208 SPATA33Q96N06 139 aa25.65■■□□□ 1.7
BRF1-216ENST00000550208 TELO2Q9Y4R8 837 aa25.65■■□□□ 1.7
BRF1-216ENST00000550208 IGLV3-22A0A075B6J6 115 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 MMP3P08254 477 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 GJB2P29033 226 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 INF2Q27J81 1249 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 HSDL1Q3SXM5 330 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 PIK3AP1Q6ZUJ8 805 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 NIPA1Q7RTP0 329 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 DIS3L2Q8IYB7 885 aaKnown RBP25.64■■□□□ 1.7
BRF1-216ENST00000550208 FBXO18Q8NFZ0 1043 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 SNX21Q969T3 373 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 GLT1D1Q96MS3 346 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 UIMC1Q96RL1 719 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 BRMS1Q9HCU9 246 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 STARD7Q9NQZ5 370 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 POLR3EQ9NVU0 708 aa25.64■■□□□ 1.7
BRF1-216ENST00000550208 FAM205CA6NFA0 338 aa25.63■■□□□ 1.69
BRF1-216ENST00000550208 METTL7BQ6UX53 244 aa25.63■■□□□ 1.69
BRF1-216ENST00000550208 PPTC7Q8NI37 304 aa25.63■■□□□ 1.69
BRF1-216ENST00000550208 AGO4Q9HCK5 861 aaKnown RBP25.63■■□□□ 1.69
BRF1-216ENST00000550208 SMC3Q9UQE7 1217 aa25.63■■□□□ 1.69
BRF1-216ENST00000550208 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.63■■□□□ 1.69
BRF1-216ENST00000550208 ELP1O95163 1332 aa25.63■■□□□ 1.69
BRF1-216ENST00000550208 KPNA6O60684 536 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms