RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-223ENST00000550188 TRIM43Q96BQ3 446 aaPredicted RBP13.69□□□□□ -0.22
ARFGAP1-223ENST00000550188 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
ARFGAP1-223ENST00000550188 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
ARFGAP1-223ENST00000550188 SLC26A6Q9BXS9 759 aa13.69□□□□□ -0.22
ARFGAP1-223ENST00000550188 TMEM39AQ9NV64 488 aa13.69□□□□□ -0.22
ARFGAP1-223ENST00000550188 PCDHA6Q9UN73 950 aa13.69□□□□□ -0.22
ARFGAP1-223ENST00000550188 PCDHA8Q9Y5H6 950 aa13.69□□□□□ -0.22
ARFGAP1-223ENST00000550188 GRIN2DO15399 1336 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 ESYT2A0FGR8 921 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 SPATA31C2B4DYI2 1134 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 GGPS1O95749 300 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 STK3Q13188 491 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 AP3B2Q13367 1082 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 PKN1Q16512 942 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 DGKDQ16760 1214 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 CELF3Q5SZQ8 465 aaKnown RBP13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 MYSM1Q5VVJ2 828 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 TBC1D32Q96NH3 1257 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 UBE2OQ9C0C9 1292 aaKnown RBP13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 C6orf50Q9HD87 102 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 RTEL1Q9NZ71 1219 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 PCDH10Q9P2E7 1040 aa13.68□□□□□ -0.22
ARFGAP1-223ENST00000550188 CDKL5O76039 1030 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 CD4P01730 458 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 RAG1P15918 1043 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 GNA11P29992 359 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 CLK2P49760 499 aaKnown RBP13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 SP2Q02086 613 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 NEDD9Q14511 834 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 MCTP2Q6DN12 878 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 NFRKBQ6P4R8 1299 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 GPRASP2Q96D09 838 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 CDHR1Q96JP9 859 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 SPATA33Q96N06 139 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 ZMYND12Q9H0C1 365 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 SLKQ9H2G2 1235 aaPredicted RBP13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 MLXIPQ9HAP2 919 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 TBX21Q9UL17 535 aa13.67□□□□□ -0.22
ARFGAP1-223ENST00000550188 PPFIA3O75145 1194 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 HOXD8P13378 290 aaPredicted RBP13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 AK2P54819 239 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 SEMA3FQ13275 785 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 RABEP1Q15276 862 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 NBPF20Q3BBV1 942 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 HSDL1Q3SXM5 330 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 FAM47CQ5HY64 1035 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 METTL7BQ6UX53 244 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 TDHQ8IZJ6 230 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 REXO1Q8N1G1 1221 aaKnown RBP13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 GIMAP8Q8ND71 665 aaPredicted RBP13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 BICD2Q8TD16 824 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 BADQ92934 168 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 SENP7Q9BQF6 1050 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 KATNAL1Q9BW62 490 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 ANO3Q9BYT9 981 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 SH3GLB2Q9NR46 395 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 TPCN1Q9ULQ1 816 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 UBIAD1Q9Y5Z9 338 aa13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 BAZ2BQ9UIF8 2168 aaKnown RBP13.66□□□□□ -0.22
ARFGAP1-223ENST00000550188 NOP56O00567 594 aaKnown RBP13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 MAFGO15525 162 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 SORBS3O60504 671 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 B4GALT4O60513 344 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 PFKFB2O60825 505 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 PPFIA4O75335 1185 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 DEXIO95424 95 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 F2P00734 622 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 TIMP1P01033 207 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 SUPT20HL2P0C7V6 817 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 ZNF286BP0CG31 522 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 ITGB5P18084 799 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 ITGB8P26012 769 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 SREBF1P36956 1147 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 NEK4P51957 841 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 PTPN11Q06124 597 aaPredicted RBP13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 SCRN1Q12765 414 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 MTMR1Q13613 665 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 PGBD1Q96JS3 809 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 TMEM260Q9NX78 707 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 VPS54Q9P1Q0 977 aa13.65□□□□□ -0.22
ARFGAP1-223ENST00000550188 ST18O60284 1047 aa13.64□□□□□ -0.23
ARFGAP1-223ENST00000550188 CHMP4BP1P59074 171 aa13.64□□□□□ -0.23
ARFGAP1-223ENST00000550188 FPGSQ05932 587 aa13.64□□□□□ -0.23
ARFGAP1-223ENST00000550188 JAKMIP3Q5VZ66 844 aa13.64□□□□□ -0.23
ARFGAP1-223ENST00000550188 CYFIP1Q7L576 1253 aa13.64□□□□□ -0.23
ARFGAP1-223ENST00000550188 FAM177A1Q8N128 213 aaPredicted RBP13.64□□□□□ -0.23
ARFGAP1-223ENST00000550188 KAT2BQ92831 832 aa13.64□□□□□ -0.23
ARFGAP1-223ENST00000550188 TRPV6Q9H1D0 765 aa13.64□□□□□ -0.23
ARFGAP1-223ENST00000550188 HIPK3Q9H422 1215 aa13.64□□□□□ -0.23
ARFGAP1-223ENST00000550188 JADE2Q9NQC1 790 aa13.64□□□□□ -0.23
ARFGAP1-223ENST00000550188 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
ARFGAP1-223ENST00000550188 KCNA2P16389 499 aa13.63□□□□□ -0.23
ARFGAP1-223ENST00000550188 PSEN2P49810 448 aa13.63□□□□□ -0.23
ARFGAP1-223ENST00000550188 FXR1P51114 621 aaKnown RBP eCLIP13.63□□□□□ -0.23
ARFGAP1-223ENST00000550188 NLRP5P59047 1200 aa13.63□□□□□ -0.23
ARFGAP1-223ENST00000550188 ARHGAP4P98171 946 aa13.63□□□□□ -0.23
ARFGAP1-223ENST00000550188 MFSD10Q14728 455 aa13.63□□□□□ -0.23
ARFGAP1-223ENST00000550188 CEP55Q53EZ4 464 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms