RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 HOMER3Q9NSC5 361 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 DAAM1Q9Y4D1 1078 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 CLIC2O15247 247 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 ALDH3A1P30838 453 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 TBX2Q13207 712 aaPredicted RBP11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 DGKHQ86XP1 1220 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 MAGOHBQ96A72 148 aaKnown RBP11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 EMILIN3Q9NT22 766 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 EHD2Q9NZN4 543 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 DDX39AO00148 427 aaKnown RBP11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 BACH1O14867 736 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 GFPT2O94808 682 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 CSF1RP07333 972 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 SRGNP10124 158 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 STX2P32856 288 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 ACTN3Q08043 901 aaPredicted RBP11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 TCP10Q12799 353 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 GLE1Q53GS7 698 aaKnown RBP11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 FAM83BQ5T0W9 1011 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 FOXR1Q6PIV2 292 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 CROCCP2Q86T23 111 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 LACRTQ9GZZ8 138 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 PTPN22Q9Y2R2 807 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 PNPLA7Q6ZV29 1317 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 KNDC1Q76NI1 1749 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 ARHGEF35A5YM69 484 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 MEIS1O00470 390 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 BCRP11274 1271 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 SLC16A2P36021 539 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 CORO7P57737 925 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 UBE2SQ16763 222 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 UNC13DQ70J99 1090 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 USP37Q86T82 979 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 ZNF622Q969S3 477 aaKnown RBP eCLIP11.17□□□□□ -0.623e-7■■□□□ 12.6
SMARCC2-209ENST00000550164 IQCGQ9H095 443 aaKnown RBP11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 DDX47Q9H0S4 455 aaKnown RBP11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 GGA1Q9UJY5 639 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 XDHP47989 1333 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 SLC8A1P32418 973 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 MXRA7P84157 204 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 ADCY1Q08828 1119 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 NEDD9Q14511 834 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 ZKSCAN8Q15776 578 aaPredicted RBP11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 FAM133BQ5BKY9 247 aaKnown RBP11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 ELOA2Q8IYF1 753 aaPredicted RBP11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 TRIM9Q9C026 710 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 BZW2Q9Y6E2 419 aaKnown RBP11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 EIF3HO15372 352 aaKnown RBP eCLIP11.17□□□□□ -0.625e-8■■■■□ 21.3
SMARCC2-209ENST00000550164 CFBP00751 764 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 FAM114A2Q9NRY5 505 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 HOMER2Q9NSB8 354 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 HDAC9Q9UKV0 1011 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 PXDNQ92626 1479 aa11.17□□□□□ -0.62
SMARCC2-209ENST00000550164 LRRN2O75325 713 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 AFPP02771 609 aaKnown RBP11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 PLEKP08567 350 aaPredicted RBP11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 MESDQ14696 234 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 KCNB1Q14721 858 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 UAP1Q16222 522 aaPredicted RBP11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 FMO2Q99518 471 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 PPP1R12CQ9BZL4 782 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 GLT8D2Q9H1C3 349 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 METTL14Q9HCE5 456 aaKnown RBP11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 RBM12Q9NTZ6 932 aaKnown RBP11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 C6orf163Q5TEZ5 329 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 CDKAL1Q5VV42 579 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 WDR93Q6P2C0 686 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 TRAPPC11Q7Z392 1133 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 N4BP2L2Q92802 583 aaPredicted RBP11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 PBKQ96KB5 322 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 TMEM47Q9BQJ4 181 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 PCDHA1Q9Y5I3 950 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 KRT15P19012 456 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 CASP7P55210 303 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 GTF2IP78347 998 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 PPP2R5EQ16537 467 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 NLRP14Q86W24 1093 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 PROCA1Q8NCQ7 364 aaPredicted RBP11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 TMEM60Q9H2L4 133 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 DMGDHQ9UI17 866 aaKnown RBP11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 DIP2AQ14689 1571 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 CHUKO15111 745 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 FGGP02679 453 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 PEX19P40855 299 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 CARSP49589 748 aaKnown RBP11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 MAGOHP61326 146 aaKnown RBP11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 BANK1Q8NDB2 785 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 PPP1R14CQ8TAE6 165 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 SH3GLB2Q9NR46 395 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 TMEM260Q9NX78 707 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 PARP2Q9UGN5 583 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 USTQ9Y2C2 406 aa11.16□□□□□ -0.62
SMARCC2-209ENST00000550164 PPP1R37O75864 691 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 GCKP35557 465 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 SEC24CP53992 1094 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 SP4Q02446 784 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 TRAF1Q13077 416 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 TRIM68Q6AZZ1 485 aa11.15□□□□□ -0.62
SMARCC2-209ENST00000550164 FBXL16Q8N461 479 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms