RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 FOXO4P98177 505 aa5.68□□□□□ -1.5
MRPL42-205ENST00000549561 CACNB2Q08289 660 aaPredicted RBP5.68□□□□□ -1.5
MRPL42-205ENST00000549561 C2orf27AQ580R0 203 aa5.68□□□□□ -1.5
MRPL42-205ENST00000549561 STEAP3Q658P3 488 aa5.68□□□□□ -1.5
MRPL42-205ENST00000549561 CNKSR3Q6P9H4 555 aa5.68□□□□□ -1.5
MRPL42-205ENST00000549561 LILRB2Q8N423 598 aa5.68□□□□□ -1.5
MRPL42-205ENST00000549561 IRF2BPLQ9H1B7 796 aa5.68□□□□□ -1.5
MRPL42-205ENST00000549561 AQP7O14520 342 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 PLA2G1BP04054 148 aaKnown RBP5.67□□□□□ -1.5
MRPL42-205ENST00000549561 LIMS1P48059 325 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 GABREP78334 506 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 HABP4Q5JVS0 413 aaKnown RBP5.67□□□□□ -1.5
MRPL42-205ENST00000549561 CYP4F22Q6NT55 531 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 ETV3LQ6ZN32 361 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 OTOP3Q7RTS5 596 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 MILR1Q7Z6M3 343 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 TMEM151BQ8IW70 566 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 FAM126BQ8IXS8 530 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 PWWP2AQ96N64 755 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 IPO9Q96P70 1041 aaKnown RBP5.67□□□□□ -1.5
MRPL42-205ENST00000549561 JAM3Q9BX67 310 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 SLC6A20Q9NP91 592 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 TRAF6Q9Y4K3 522 aa5.67□□□□□ -1.5
MRPL42-205ENST00000549561 CCDC163A0A0D9SF12 145 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 TCRBV5S2A0A599 114 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 WNT9AO14904 365 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 SOD2P04179 222 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 C8BP07358 591 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 ZSCAN22P10073 491 aaPredicted RBP5.66□□□□□ -1.5
MRPL42-205ENST00000549561 AFF3P51826 1226 aaKnown RBP5.66□□□□□ -1.5
MRPL42-205ENST00000549561 BMS1Q14692 1282 aaKnown RBP5.66□□□□□ -1.5
MRPL42-205ENST00000549561 CCDC144BQ3MJ40 725 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 TRIM61Q5EBN2 209 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 TCERG1LQ5VWI1 586 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 NLGN1Q8N2Q7 840 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 ZSWIM2Q8NEG5 633 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 SMARCC2Q8TAQ2 1214 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 PHOSPHO1Q8TCT1 267 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 PDGFDQ9GZP0 370 aaPredicted RBP5.66□□□□□ -1.5
MRPL42-205ENST00000549561 SMOC1Q9H4F8 434 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 FAN1Q9Y2M0 1017 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 PCDHB4Q9Y5E5 795 aa5.66□□□□□ -1.5
MRPL42-205ENST00000549561 ARVCFO00192 962 aa5.65□□□□□ -1.5
MRPL42-205ENST00000549561 DLX2Q07687 328 aaPredicted RBP5.65□□□□□ -1.5
MRPL42-205ENST00000549561 VWA3BQ502W6 1294 aa5.65□□□□□ -1.5
MRPL42-205ENST00000549561 LINC00482Q8N8I6 264 aa5.65□□□□□ -1.5
MRPL42-205ENST00000549561 GSTCDQ8NEC7 633 aa5.65□□□□□ -1.5
MRPL42-205ENST00000549561 PIP4K2CQ8TBX8 421 aa5.65□□□□□ -1.5
MRPL42-205ENST00000549561 FNIP1Q8TF40 1166 aa5.65□□□□□ -1.5
MRPL42-205ENST00000549561 MRFAP1L1Q96HT8 127 aa5.65□□□□□ -1.5
MRPL42-205ENST00000549561 ALG1Q9BT22 464 aa5.65□□□□□ -1.5
MRPL42-205ENST00000549561 ZSWIM4Q9H7M6 989 aa5.65□□□□□ -1.5
MRPL42-205ENST00000549561 MYOTQ9UBF9 498 aa5.65□□□□□ -1.5
MRPL42-205ENST00000549561 PTCH2Q9Y6C5 1203 aa5.65□□□□□ -1.5
MRPL42-205ENST00000549561 FAM47E-STBD1D6RA91 191 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 KRIT1O00522 736 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 FFAR3O14843 346 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 KCNQ2O43526 872 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 MAFKO60675 156 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 PAK1Q13153 545 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 CR1LQ2VPA4 569 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 FBLN7Q53RD9 439 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 SAPCD2Q86UD0 394 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 FAM26EQ8N5C1 309 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 LINC01356Q8N9X3 169 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 ARRDC4Q8NCT1 418 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 UHMK1Q8TAS1 419 aaKnown RBP5.64□□□□□ -1.51
MRPL42-205ENST00000549561 NOX5Q96PH1 765 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 PIF1Q9H611 641 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 IPPKQ9H8X2 491 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 PCDH18Q9HCL0 1135 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 DTLQ9NZJ0 730 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 HSPBP1Q9NZL4 362 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 ASH2LQ9UBL3 628 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 PMF1-BGLAPU3KQ54 211 aa5.64□□□□□ -1.51
MRPL42-205ENST00000549561 EFCAB14O75071 495 aa5.63□□□□□ -1.51
MRPL42-205ENST00000549561 CYP2C8P10632 490 aa5.63□□□□□ -1.51
MRPL42-205ENST00000549561 NAT1P18440 290 aa5.63□□□□□ -1.51
MRPL42-205ENST00000549561 SPIRE1Q08AE8 756 aa5.63□□□□□ -1.51
MRPL42-205ENST00000549561 TP53I13Q8NBR0 393 aaPredicted RBP5.63□□□□□ -1.51
MRPL42-205ENST00000549561 TTLL11Q8NHH1 800 aa5.63□□□□□ -1.51
MRPL42-205ENST00000549561 PCDH19Q8TAB3 1148 aa5.63□□□□□ -1.51
MRPL42-205ENST00000549561 SLC7A14Q8TBB6 771 aa5.63□□□□□ -1.51
MRPL42-205ENST00000549561 MRPL4Q9BYD3 311 aaKnown RBP5.63□□□□□ -1.51
MRPL42-205ENST00000549561 SLC52A2Q9HAB3 445 aa5.63□□□□□ -1.51
MRPL42-205ENST00000549561 NGRNQ9NPE2 291 aaKnown RBP5.63□□□□□ -1.51
MRPL42-205ENST00000549561 PCDHA8Q9Y5H6 950 aa5.63□□□□□ -1.51
MRPL42-205ENST00000549561 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.62□□□□□ -1.51
MRPL42-205ENST00000549561 SH3D21A4FU49 640 aa5.62□□□□□ -1.51
MRPL42-205ENST00000549561 NKRFO15226 690 aaKnown RBP eCLIP5.62□□□□□ -1.51
MRPL42-205ENST00000549561 CRTAMO95727 393 aa5.62□□□□□ -1.51
MRPL42-205ENST00000549561 GNAT1P11488 350 aa5.62□□□□□ -1.51
MRPL42-205ENST00000549561 EPHA5P54756 1037 aa5.62□□□□□ -1.51
MRPL42-205ENST00000549561 SQSTM1Q13501 440 aa5.62□□□□□ -1.51
MRPL42-205ENST00000549561 CD300LDQ6UXZ3 194 aa5.62□□□□□ -1.51
MRPL42-205ENST00000549561 MTDHQ86UE4 582 aaKnown RBP5.62□□□□□ -1.51
MRPL42-205ENST00000549561 ZC3H18Q86VM9 953 aaKnown RBP5.62□□□□□ -1.51
MRPL42-205ENST00000549561 TRIM48Q8IWZ4 208 aa5.62□□□□□ -1.51
MRPL42-205ENST00000549561 CLEC4DQ8WXI8 215 aa5.62□□□□□ -1.51
MRPL42-205ENST00000549561 DDX11Q96FC9 970 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms