RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 SUPT20HL2P0C7V6 817 aa22.89■■□□□ 1.26
CTDSP2-204ENST00000548823 FAM178BQ8IXR5 827 aa22.89■■□□□ 1.26
CTDSP2-204ENST00000548823 SYAP1Q96A49 352 aaPredicted RBP22.89■■□□□ 1.26
CTDSP2-204ENST00000548823 UIMC1Q96RL1 719 aa22.89■■□□□ 1.26
CTDSP2-204ENST00000548823 ZSCAN10Q96SZ4 725 aaPredicted RBP22.89■■□□□ 1.26
CTDSP2-204ENST00000548823 FAM217BQ9NTX9 383 aaPredicted RBP22.89■■□□□ 1.26
CTDSP2-204ENST00000548823 CYP2D7A0A087X1C5 515 aa22.89■■□□□ 1.25
CTDSP2-204ENST00000548823 DYNC1LI2O43237 492 aaPredicted RBP22.89■■□□□ 1.25
CTDSP2-204ENST00000548823 ALADP13716 330 aa22.89■■□□□ 1.25
CTDSP2-204ENST00000548823 IFNAR1P17181 557 aa22.89■■□□□ 1.25
CTDSP2-204ENST00000548823 PSMC6P62333 389 aa22.89■■□□□ 1.25
CTDSP2-204ENST00000548823 FERMT3Q86UX7 667 aa22.89■■□□□ 1.25
CTDSP2-204ENST00000548823 HERC6Q8IVU3 1022 aa22.89■■□□□ 1.25
CTDSP2-204ENST00000548823 RAVER2Q9HCJ3 691 aaKnown RBP22.89■■□□□ 1.25
CTDSP2-204ENST00000548823 TNKSO95271 1327 aa22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 GOLGA6L3A6NEY3 463 aa22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 CDC27P30260 824 aa22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 RFC2P35250 354 aa22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 ADD1P35611 737 aaKnown RBP22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 CNTN2Q02246 1040 aa22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 FOXD4L6Q3SYB3 417 aaPredicted RBP22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 CCDC178Q5BJE1 867 aa22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 CAVIN1Q6NZI2 390 aaKnown RBP22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 FOXD4L3Q6VB84 417 aaPredicted RBP22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 MICU3Q86XE3 530 aa22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 FBXO18Q8NFZ0 1043 aa22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 C8orf76Q96K31 380 aa22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 SLC38A10Q9HBR0 1119 aa22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 Q9Y3F1 56 aa22.88■■□□□ 1.25
CTDSP2-204ENST00000548823 F5H6K3 240 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 CALM1P0DP23 149 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 CALM2P0DP24 149 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 CALM3P0DP25 149 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 CYP2C9P11712 490 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 SMPD1P17405 629 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 OAZ1P54368 228 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 KLRC3Q07444 240 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 ZNF654Q8IZM8 581 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 FAM133AQ8N9E0 248 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 GDPD2Q9HCC8 539 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 CFAP45Q9UL16 551 aa22.87■■□□□ 1.25
CTDSP2-204ENST00000548823 COL4A4P53420 1690 aaPredicted RBP22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 ASB14A6NK59 587 aa22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 FIBPO43427 364 aa22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 RANBP6O60518 1105 aaKnown RBP22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 GADD45BO75293 160 aaPredicted RBP22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 RTN1Q16799 776 aa22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 IQSEC1Q6DN90 963 aa22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 ENAHQ8N8S7 591 aaPredicted RBP22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 WASF1Q92558 559 aa22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 UBE2ZQ9H832 354 aaPredicted RBP22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 TRMT13Q9NUP7 481 aaKnown RBP22.86■■□□□ 1.25
CTDSP2-204ENST00000548823 DDAH1O94760 285 aa22.85■■□□□ 1.25
CTDSP2-204ENST00000548823 NDUFB10O96000 172 aa22.85■■□□□ 1.25
CTDSP2-204ENST00000548823 ZSCAN23Q3MJ62 389 aa22.85■■□□□ 1.25
CTDSP2-204ENST00000548823 LEXMQ3ZCV2 418 aa22.85■■□□□ 1.25
CTDSP2-204ENST00000548823 ANKS1AQ92625 1134 aa22.85■■□□□ 1.25
CTDSP2-204ENST00000548823 KIFC2Q96AC6 838 aa22.85■■□□□ 1.25
CTDSP2-204ENST00000548823 FBXL18Q96ME1 805 aa22.85■■□□□ 1.25
CTDSP2-204ENST00000548823 ZKSCAN3Q9BRR0 538 aa22.85■■□□□ 1.25
CTDSP2-204ENST00000548823 ZNF287Q9HBT7 754 aa22.85■■□□□ 1.25
CTDSP2-204ENST00000548823 NYAP2Q9P242 653 aa22.85■■□□□ 1.25
CTDSP2-204ENST00000548823 GREB1LQ9C091 1923 aaPredicted RBP22.85■■□□□ 1.25
CTDSP2-204ENST00000548823 SSTR3P32745 418 aaPredicted RBP22.84■■□□□ 1.25
CTDSP2-204ENST00000548823 SSRP1Q08945 709 aaKnown RBP22.84■■□□□ 1.25
CTDSP2-204ENST00000548823 BRAPQ7Z569 592 aa22.84■■□□□ 1.25
CTDSP2-204ENST00000548823 FANCBQ8NB91 859 aa22.84■■□□□ 1.25
CTDSP2-204ENST00000548823 ZNF396Q96N95 335 aaPredicted RBP22.84■■□□□ 1.25
CTDSP2-204ENST00000548823 TCP11L1Q9NUJ3 509 aa22.84■■□□□ 1.25
CTDSP2-204ENST00000548823 TMEM63CQ9P1W3 806 aa22.84■■□□□ 1.25
CTDSP2-204ENST00000548823 PTGS1P23219 599 aa22.83■■□□□ 1.25
CTDSP2-204ENST00000548823 IFIT1BQ5T764 474 aaKnown RBP22.83■■□□□ 1.25
CTDSP2-204ENST00000548823 SPRED2Q7Z698 418 aa22.83■■□□□ 1.25
CTDSP2-204ENST00000548823 RAB11FIP4Q86YS3 637 aa22.83■■□□□ 1.25
CTDSP2-204ENST00000548823 RBM28Q9NW13 759 aaKnown RBP22.83■■□□□ 1.25
CTDSP2-204ENST00000548823 SOWAHBA6NEL2 793 aa22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 CATIPQ7Z7H3 387 aa22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 STK11IPQ8N1F8 1099 aa22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 GDPD5Q8WTR4 605 aa22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 LEO1Q8WVC0 666 aaPredicted RBP22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 SPATA32Q96LK8 384 aa22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 ALG1Q9BT22 464 aa22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 FTOQ9C0B1 505 aaKnown RBP eCLIP22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 ACAD9Q9H845 621 aa22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 PDGFCQ9NRA1 345 aa22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 HOMER2Q9NSB8 354 aa22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 FEM1BQ9UK73 627 aa22.82■■□□□ 1.24
CTDSP2-204ENST00000548823 WDFY4Q6ZS81 3184 aa22.81■■□□□ 1.24
CTDSP2-204ENST00000548823 PITPNM1O00562 1244 aa22.81■■□□□ 1.24
CTDSP2-204ENST00000548823 BAIAP3O94812 1187 aa22.81■■□□□ 1.24
CTDSP2-204ENST00000548823 IQCF3P0C7M6 154 aa22.81■■□□□ 1.24
CTDSP2-204ENST00000548823 RXRAP19793 462 aa22.81■■□□□ 1.24
CTDSP2-204ENST00000548823 TAPT1Q6NXT6 567 aa22.81■■□□□ 1.24
CTDSP2-204ENST00000548823 DGKHQ86XP1 1220 aa22.81■■□□□ 1.24
CTDSP2-204ENST00000548823 TRIM22Q8IYM9 498 aa22.81■■□□□ 1.24
CTDSP2-204ENST00000548823 MAP3K14Q99558 947 aa22.81■■□□□ 1.24
CTDSP2-204ENST00000548823 MYL10Q9BUA6 226 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms