RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 USP17L22D6RA61 530 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 USP17L17D6RBQ6 530 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 USP17L19D6RCP7 530 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 USP17L20D6RJB6 530 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 GNRH1P01148 92 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 FLT3LGP49771 235 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 GSDMDP57764 484 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 USP17L24Q0WX57 530 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 E2F4Q16254 413 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 UBE2SQ16763 222 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 DTHD1Q6ZMT9 781 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 FBXO11Q86XK2 927 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 CHURC1Q8WUH1 139 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 CUL5Q93034 780 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 ARMC5Q96C12 935 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 ZNF333Q96JL9 665 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 TANGO6Q9C0B7 1094 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 PSTPIP2Q9H939 334 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 CBFA2T2O43439 604 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 SERPINC1P01008 464 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 ELNP15502 786 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 HOXD10P28358 340 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 DPYDQ12882 1025 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 USH1GQ495M9 461 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 ENOX1Q8TC92 643 aaKnown RBP18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 TBCKQ8TEA7 893 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 TXLNAP40222 546 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 CLK2P49760 499 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 MRPL12P52815 198 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 UBASH3AP57075 661 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 MTFR1Q15390 333 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 TMC6Q7Z403 805 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 KIFC2Q96AC6 838 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 GSDMAQ96QA5 445 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 PORCNQ9H237 461 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 TMEM60Q9H2L4 133 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 FBXO28Q9NVF7 368 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 RBBP6Q7Z6E9 1792 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 LAD1O00515 517 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 TAL1P17542 331 aaPredicted RBP18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 CASP1P29466 404 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 RGS19P49795 217 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 ERVK-9P63128 1117 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 ERVK-24P63145 666 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 LETM2Q2VYF4 491 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 NEK8Q86SG6 692 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 GPRC5AQ8NFJ5 357 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 MORF4L1Q9UBU8 362 aa18.61■□□□□ 0.57
CHMP1A-204ENST00000547687 PLA2G6O60733 806 aa18.6■□□□□ 0.57
CHMP1A-204ENST00000547687 CNMDO75829 334 aa18.6■□□□□ 0.57
CHMP1A-204ENST00000547687 TPM2P07951 284 aa18.6■□□□□ 0.57
CHMP1A-204ENST00000547687 ERCC5P28715 1186 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-204ENST00000547687 GRK4P32298 578 aa18.6■□□□□ 0.57
CHMP1A-204ENST00000547687 MLLT1Q03111 559 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-204ENST00000547687 CT47A1Q5JQC4 288 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-204ENST00000547687 PDXDC2PQ6P474 469 aa18.6■□□□□ 0.57
CHMP1A-204ENST00000547687 FAM160B2Q86V87 743 aa18.6■□□□□ 0.57
CHMP1A-204ENST00000547687 LPAR1Q92633 364 aa18.6■□□□□ 0.57
CHMP1A-204ENST00000547687 FEM1BQ9UK73 627 aa18.6■□□□□ 0.57
CHMP1A-204ENST00000547687 SPDYE16A6NNV3 312 aaPredicted RBP18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 CCNT1O60563 726 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 USP17L6PQ6QN14 398 aa18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 STAMQ92783 540 aa18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 BTBD7Q9P203 1132 aa18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 WDR46O15213 610 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 SKILP12757 684 aa18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 EN2P19622 333 aaPredicted RBP18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 CDC25AP30304 524 aa18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 PRPHP41219 470 aa18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 RANBP17Q9H2T7 1088 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 NFE2L3Q9Y4A8 694 aa18.59■□□□□ 0.57
CHMP1A-204ENST00000547687 ADCY3O60266 1144 aa18.58■□□□□ 0.56
CHMP1A-204ENST00000547687 PRMT2P55345 433 aa18.58■□□□□ 0.56
CHMP1A-204ENST00000547687 DHX8Q14562 1220 aaKnown RBP18.58■□□□□ 0.56
CHMP1A-204ENST00000547687 CCDC174Q6PII3 467 aa18.58■□□□□ 0.56
CHMP1A-204ENST00000547687 GLT8D2Q9H1C3 349 aa18.58■□□□□ 0.56
CHMP1A-204ENST00000547687 MYH7BA7E2Y1 1941 aa18.58■□□□□ 0.56
CHMP1A-204ENST00000547687 MEIS2O14770 477 aa18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 GTPBP6O43824 516 aaPredicted RBP18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 EDIL3O43854 480 aa18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 FLOT1O75955 427 aa18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 CCZ1BP86790 482 aa18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 CCZ1P86791 482 aaPredicted RBP18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 WDR78Q5VTH9 848 aa18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 TRMT44Q8IYL2 757 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 BLZF1Q9H2G9 400 aa18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 A0A0G2JMZ2 1700 aa18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 CDK11BP21127 795 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 STAT6P42226 847 aa18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 KARSQ15046 597 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 CCDC150Q8NCX0 1101 aa18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 MED15Q96RN5 788 aa18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 MTRQ99707 1265 aa18.57■□□□□ 0.56
CHMP1A-204ENST00000547687 OPLAHO14841 1288 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 OR52Z1P0C646 297 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 ZNF18P17022 549 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 UBA7P41226 1012 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 ATG4CQ96DT6 458 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 CCSER1Q9C0I3 900 aa18.56■□□□□ 0.56
CHMP1A-204ENST00000547687 DISC1Q9NRI5 854 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms