RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 GGPS1O95749 300 aa26.73■■□□□ 1.87
SMARCD1-204ENST00000547637 CXCL10P02778 98 aa26.73■■□□□ 1.87
SMARCD1-204ENST00000547637 ZNF286BP0CG31 522 aa26.73■■□□□ 1.87
SMARCD1-204ENST00000547637 HOXA13P31271 388 aaPredicted RBP26.73■■□□□ 1.87
SMARCD1-204ENST00000547637 WTAPQ15007 396 aa26.73■■□□□ 1.87
SMARCD1-204ENST00000547637 GNPTABQ3T906 1256 aa26.73■■□□□ 1.87
SMARCD1-204ENST00000547637 CYB5R4Q7L1T6 521 aa26.73■■□□□ 1.87
SMARCD1-204ENST00000547637 FCHSD1Q86WN1 690 aa26.73■■□□□ 1.87
SMARCD1-204ENST00000547637 NCOA7Q8NI08 942 aa26.73■■□□□ 1.87
SMARCD1-204ENST00000547637 CTAGE1Q96RT6 745 aa26.73■■□□□ 1.87
SMARCD1-204ENST00000547637 EMSYQ7Z589 1322 aa26.72■■□□□ 1.87
SMARCD1-204ENST00000547637 PNMA6FA0A0J9YX94 578 aa26.72■■□□□ 1.87
SMARCD1-204ENST00000547637 OPLAHO14841 1288 aa26.72■■□□□ 1.87
SMARCD1-204ENST00000547637 GRM4Q14833 912 aa26.72■■□□□ 1.87
SMARCD1-204ENST00000547637 TTC22Q5TAA0 569 aa26.72■■□□□ 1.87
SMARCD1-204ENST00000547637 CATIPQ7Z7H3 387 aa26.72■■□□□ 1.87
SMARCD1-204ENST00000547637 DHX38Q92620 1227 aaKnown RBP26.72■■□□□ 1.87
SMARCD1-204ENST00000547637 RAD9AQ99638 391 aa26.72■■□□□ 1.87
SMARCD1-204ENST00000547637 RIOX1Q9H6W3 641 aa26.72■■□□□ 1.87
SMARCD1-204ENST00000547637 LMCD1Q9NZU5 365 aa26.72■■□□□ 1.87
SMARCD1-204ENST00000547637 NCOR1O75376 2440 aa26.72■■□□□ 1.87
SMARCD1-204ENST00000547637 STAM2O75886 525 aa26.71■■□□□ 1.87
SMARCD1-204ENST00000547637 HOXD8P13378 290 aaPredicted RBP26.71■■□□□ 1.87
SMARCD1-204ENST00000547637 PIGSQ96S52 555 aa26.71■■□□□ 1.87
SMARCD1-204ENST00000547637 NOP56O00567 594 aaKnown RBP26.7■■□□□ 1.86
SMARCD1-204ENST00000547637 PPP1R11O60927 126 aaPredicted RBP26.7■■□□□ 1.86
SMARCD1-204ENST00000547637 NBNO60934 754 aa26.7■■□□□ 1.86
SMARCD1-204ENST00000547637 HSDL1Q3SXM5 330 aa26.7■■□□□ 1.86
SMARCD1-204ENST00000547637 RGS20O76081 388 aa26.69■■□□□ 1.86
SMARCD1-204ENST00000547637 GJB5O95377 273 aa26.69■■□□□ 1.86
SMARCD1-204ENST00000547637 CYP21A2P08686 494 aa26.69■■□□□ 1.86
SMARCD1-204ENST00000547637 BMP1P13497 986 aa26.69■■□□□ 1.86
SMARCD1-204ENST00000547637 GRB10Q13322 594 aa26.69■■□□□ 1.86
SMARCD1-204ENST00000547637 GPNMBQ14956 572 aa26.69■■□□□ 1.86
SMARCD1-204ENST00000547637 ZNF618Q5T7W0 954 aa26.69■■□□□ 1.86
SMARCD1-204ENST00000547637 HLA-CQ95604 372 aa26.69■■□□□ 1.86
SMARCD1-204ENST00000547637 C17orf102A2RUQ5 167 aa26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 H3BRB1 525 aa26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 LGR5O75473 907 aa26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 GNAT1P11488 350 aa26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 UBA1P22314 1058 aaKnown RBP26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 TFF2Q03403 129 aa26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 NEDD9Q14511 834 aa26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 CUL5Q93034 780 aa26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 USP26Q9BXU7 913 aa26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 TUT1Q9H6E5 874 aaKnown RBP26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 BAZ2BQ9UIF8 2168 aaKnown RBP26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 CHD9Q3L8U1 2897 aa26.68■■□□□ 1.86
SMARCD1-204ENST00000547637 EPOPA6NHQ4 379 aa26.67■■□□□ 1.86
SMARCD1-204ENST00000547637 RSPH10B2B2RC85 870 aa26.67■■□□□ 1.86
SMARCD1-204ENST00000547637 SORBS3O60504 671 aa26.67■■□□□ 1.86
SMARCD1-204ENST00000547637 RSPH10BP0C881 870 aa26.67■■□□□ 1.86
SMARCD1-204ENST00000547637 THPOP40225 353 aa26.67■■□□□ 1.86
SMARCD1-204ENST00000547637 DEFB103AP81534 67 aa26.67■■□□□ 1.86
SMARCD1-204ENST00000547637 ATP6V0A1Q93050 837 aa26.67■■□□□ 1.86
SMARCD1-204ENST00000547637 TGS1Q96RS0 853 aaKnown RBP26.67■■□□□ 1.86
SMARCD1-204ENST00000547637 IL25Q9H293 177 aa26.67■■□□□ 1.86
SMARCD1-204ENST00000547637 INSL6Q9Y581 213 aa26.67■■□□□ 1.86
SMARCD1-204ENST00000547637 TCF20Q9UGU0 1960 aaKnown RBP26.67■■□□□ 1.86
SMARCD1-204ENST00000547637 AMHP03971 560 aa26.66■■□□□ 1.86
SMARCD1-204ENST00000547637 COL9A1P20849 921 aa26.66■■□□□ 1.86
SMARCD1-204ENST00000547637 CHMLP26374 656 aa26.66■■□□□ 1.86
SMARCD1-204ENST00000547637 ZNF200P98182 395 aaPredicted RBP26.66■■□□□ 1.86
SMARCD1-204ENST00000547637 SERINC5Q86VE9 423 aa26.66■■□□□ 1.86
SMARCD1-204ENST00000547637 CTCFLQ8NI51 663 aaPredicted RBP26.66■■□□□ 1.86
SMARCD1-204ENST00000547637 C16orf70Q9BSU1 422 aa26.66■■□□□ 1.86
SMARCD1-204ENST00000547637 SPTBN5Q9NRC6 3674 aaKnown RBP26.66■■□□□ 1.86
SMARCD1-204ENST00000547637 E7EWF7 191 aa26.65■■□□□ 1.86
SMARCD1-204ENST00000547637 GSPT1P15170 499 aaKnown RBP26.65■■□□□ 1.86
SMARCD1-204ENST00000547637 KIF5BP33176 963 aa26.65■■□□□ 1.86
SMARCD1-204ENST00000547637 SP2Q02086 613 aa26.65■■□□□ 1.86
SMARCD1-204ENST00000547637 TROAPQ12815 778 aa26.65■■□□□ 1.86
SMARCD1-204ENST00000547637 TRIM71Q2Q1W2 868 aaKnown RBP26.65■■□□□ 1.86
SMARCD1-204ENST00000547637 SMARCC2Q8TAQ2 1214 aa26.65■■□□□ 1.86
SMARCD1-204ENST00000547637 CAND2O75155 1236 aa26.64■■□□□ 1.86
SMARCD1-204ENST00000547637 ARHGEF15O94989 841 aa26.64■■□□□ 1.86
SMARCD1-204ENST00000547637 KCNQ1P51787 676 aa26.64■■□□□ 1.86
SMARCD1-204ENST00000547637 PTH1RQ03431 593 aa26.64■■□□□ 1.86
SMARCD1-204ENST00000547637 IL31RAQ8NI17 732 aa26.64■■□□□ 1.86
SMARCD1-204ENST00000547637 RRP36Q96EU6 259 aaKnown RBP26.64■■□□□ 1.86
SMARCD1-204ENST00000547637 MAP3K14Q99558 947 aa26.64■■□□□ 1.86
SMARCD1-204ENST00000547637 C1QTNF1Q9BXJ1 281 aa26.64■■□□□ 1.86
SMARCD1-204ENST00000547637 SEC63Q9UGP8 760 aaKnown RBP26.64■■□□□ 1.86
SMARCD1-204ENST00000547637 ZNF215Q9UL58 517 aaPredicted RBP26.64■■□□□ 1.86
SMARCD1-204ENST00000547637 LCHNA4D1U4 455 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 FIBPO43427 364 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 CYTH3O43739 400 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 LGALS2P05162 132 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 ICAM3P32942 547 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 ERVK-21P61565 698 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 KRT40Q6A162 431 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 FAM117BQ6P1L5 589 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 XRRA1Q6P2D8 792 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 CASC1Q6TDU7 716 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 METTL7BQ6UX53 244 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 TMCO2Q7Z6W1 182 aaPredicted RBP26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 NLRX1Q86UT6 975 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 TMTC2Q8N394 836 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 LZTS2Q9BRK4 669 aa26.63■■□□□ 1.85
SMARCD1-204ENST00000547637 SMIM10L2AP0DMW4 78 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms