RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 SSRP1Q08945 709 aaKnown RBP3.18□□□□□ -1.9
CPNE8-205ENST00000547417 KIAA2012Q0VF49 1180 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 SQSTM1Q13501 440 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 FAM178BQ8IXR5 827 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 TTC9BQ8N6N2 239 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 LINC00482Q8N8I6 264 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 ZSWIM2Q8NEG5 633 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 MICAL1Q8TDZ2 1067 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 USP33Q8TEY7 942 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 DDX11Q96FC9 970 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 MCMBPQ9BTE3 642 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 C1QTNF3Q9BXJ4 246 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 PCDH18Q9HCL0 1135 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 FBLN5Q9UBX5 448 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 KDM2BQ8NHM5 1336 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 TRBV23OR9-2A0A075B6M9 112 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 STXBP3O00186 592 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 VAMP4O75379 141 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 CYP2C8P10632 490 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 PAMP19021 973 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 MASP1P48740 699 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 SMAD4Q13485 552 aaKnown RBP3.17□□□□□ -1.9
CPNE8-205ENST00000547417 RGL3Q3MIN7 710 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 GNPTABQ3T906 1256 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 TBC1D10BQ4KMP7 808 aaPredicted RBP3.17□□□□□ -1.9
CPNE8-205ENST00000547417 WWC2Q6AWC2 1192 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 C6orf15Q6UXA7 325 aaPredicted RBP3.17□□□□□ -1.9
CPNE8-205ENST00000547417 RUFY4Q6ZNE9 571 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 KRT26Q7Z3Y9 468 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 CPNE8Q86YQ8 564 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 LGI4Q8N135 537 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 LRRC47Q8N1G4 583 aaKnown RBP3.17□□□□□ -1.9
CPNE8-205ENST00000547417 SLC16A11Q8NCK7 471 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 CHST13Q8NET6 341 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 ADCY4Q8NFM4 1077 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 SGSM3Q96HU1 749 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 C8orf49Q96NF6 230 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 HAUS7Q99871 368 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 MTA3Q9BTC8 594 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 PCGF6Q9BYE7 350 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 GBP3Q9H0R5 595 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.17□□□□□ -1.9
CPNE8-205ENST00000547417 GULP1Q9UBP9 304 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 SRRDQ9UH36 339 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 BACE2Q9Y5Z0 518 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 LTBP3Q9NS15 1303 aa3.17□□□□□ -1.9
CPNE8-205ENST00000547417 C2orf71A6NGG8 1288 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 NPHS1O60500 1241 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 PPM1BO75688 479 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 FSHBP01225 129 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 FUCA1P04066 466 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 NTRK1P04629 796 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 NAT2P11245 290 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 ZNF20P17024 532 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 RPL13P26373 211 aaKnown RBP3.16□□□□□ -1.9
CPNE8-205ENST00000547417 THBS2P35442 1172 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 ZNF143P52747 638 aaPredicted RBP3.16□□□□□ -1.9
CPNE8-205ENST00000547417 AMPD3Q01432 767 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 AMPD2Q01433 879 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 DPY19L1Q2PZI1 675 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 HEATR6Q6AI08 1181 aaKnown RBP3.16□□□□□ -1.9
CPNE8-205ENST00000547417 BORAQ6PGQ7 559 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 ADAT2Q7Z6V5 191 aaKnown RBP3.16□□□□□ -1.9
CPNE8-205ENST00000547417 FAM124AQ86V42 546 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 ZBTB38Q8NAP3 1195 aaPredicted RBP3.16□□□□□ -1.9
CPNE8-205ENST00000547417 KYQ8NBH2 561 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 GORASP1Q9BQQ3 440 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 C11orf84Q9BUA3 381 aaPredicted RBP3.16□□□□□ -1.9
CPNE8-205ENST00000547417 SPATA9Q9BWV2 254 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 KRTAP3-1Q9BYR8 98 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 KLHL25Q9H0H3 589 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 KANSL2Q9H9L4 492 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 DDX56Q9NY93 547 aaKnown RBP3.16□□□□□ -1.9
CPNE8-205ENST00000547417 INVSQ9Y283 1065 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 SIT1Q9Y3P8 196 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 ZNF536O15090 1300 aa3.16□□□□□ -1.9
CPNE8-205ENST00000547417 NPHP3-ACAD11A0A0J9YXS1 232 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 C7orf72A4D263 438 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 MROH6A6NGR9 719 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 AGRPO00253 132 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 DIAPH1O60610 1272 aaKnown RBP3.15□□□□□ -1.91
CPNE8-205ENST00000547417 RFPL3O75679 317 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 C8BP07358 591 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 SLC7A5Q01650 507 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 GRB10Q13322 594 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 DALRD3Q5D0E6 543 aaKnown RBP3.15□□□□□ -1.91
CPNE8-205ENST00000547417 FAM26FQ5R3K3 315 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 VHLLQ6RSH7 139 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 GLB1LQ6UWU2 654 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 ETV3LQ6ZN32 361 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 NOL8Q76FK4 1167 aaKnown RBP3.15□□□□□ -1.91
CPNE8-205ENST00000547417 SPATC1Q76KD6 591 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 DCP2Q8IU60 420 aaKnown RBP3.15□□□□□ -1.91
CPNE8-205ENST00000547417 RPUSD2Q8IZ73 545 aaKnown RBP3.15□□□□□ -1.91
CPNE8-205ENST00000547417 ARHGEF39Q8N4T4 335 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 TTLL6Q8N841 843 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 DVL3Q92997 716 aaPredicted RBP3.15□□□□□ -1.91
CPNE8-205ENST00000547417 RCC1LQ96I51 464 aaKnown RBP3.15□□□□□ -1.91
CPNE8-205ENST00000547417 FGD4Q96M96 766 aa3.15□□□□□ -1.91
CPNE8-205ENST00000547417 AP5M1Q9H0R1 490 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms