RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 hCG_1984214I3L0E3 225 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 PPP1R11O60927 126 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-226ENST00000547259 ICAM1P05362 532 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 FDPSP14324 419 aaKnown RBP13.85□□□□□ -0.19
HDAC7-226ENST00000547259 MRPL12P52815 198 aaKnown RBP13.85□□□□□ -0.19
HDAC7-226ENST00000547259 FOSBP53539 338 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 TRAF1Q13077 416 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 PKN1Q16512 942 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 WWC2Q6AWC2 1192 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 CXCL17Q6UXB2 119 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 ZNF713Q8N859 430 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-226ENST00000547259 AGBL1Q96MI9 1066 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 ALG1Q9BT22 464 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 PBX4Q9BYU1 374 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 PPP1R12CQ9BZL4 782 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-226ENST00000547259 SLC28A3Q9HAS3 691 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 PRDM6Q9NQX0 595 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 POLR3EQ9NVU0 708 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 ZNF536O15090 1300 aa13.85□□□□□ -0.19
HDAC7-226ENST00000547259 SPTBN5Q9NRC6 3674 aaKnown RBP13.85□□□□□ -0.19
HDAC7-226ENST00000547259 BDP1A6H8Y1 2624 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 SOWAHBA6NEL2 793 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 CTAGE5O15320 804 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 DYNC1LI2O43237 492 aaPredicted RBP13.84□□□□□ -0.19
HDAC7-226ENST00000547259 ADCY6O43306 1168 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 PFKMP08237 780 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 XBP1P17861 261 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 NAPAP54920 295 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 C16orf59Q7L2K0 433 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 AIFM3Q96NN9 605 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 CYP39A1Q9NYL5 469 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 PCDHA1Q9Y5I3 950 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 ABCB11O95342 1321 aa13.84□□□□□ -0.19
HDAC7-226ENST00000547259 STXBP3O00186 592 aa13.83□□□□□ -0.2
HDAC7-226ENST00000547259 CYP2C18P33260 490 aa13.83□□□□□ -0.2
HDAC7-226ENST00000547259 CPT1AP50416 773 aa13.83□□□□□ -0.2
HDAC7-226ENST00000547259 BEX3Q00994 111 aa13.83□□□□□ -0.2
HDAC7-226ENST00000547259 TRIM29Q14134 588 aa13.83□□□□□ -0.2
HDAC7-226ENST00000547259 PPP1R18Q6NYC8 613 aa13.83□□□□□ -0.2
HDAC7-226ENST00000547259 CCDC148Q8NFR7 591 aa13.83□□□□□ -0.2
HDAC7-226ENST00000547259 MORC4Q8TE76 937 aa13.83□□□□□ -0.2
HDAC7-226ENST00000547259 CCDC12Q8WUD4 166 aaPredicted RBP13.83□□□□□ -0.2
HDAC7-226ENST00000547259 IPO9Q96P70 1041 aaKnown RBP13.83□□□□□ -0.2
HDAC7-226ENST00000547259 BARHL2Q9NY43 387 aa13.83□□□□□ -0.2
HDAC7-226ENST00000547259 VPS54Q9P1Q0 977 aa13.83□□□□□ -0.2
HDAC7-226ENST00000547259 CHD9Q3L8U1 2897 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.82□□□□□ -0.2
HDAC7-226ENST00000547259 TNFRSF10AO00220 468 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 NKRFO15226 690 aaKnown RBP eCLIP13.82□□□□□ -0.2
HDAC7-226ENST00000547259 KPNA6O60684 536 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 ACRP10323 421 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 SMPD1P17405 629 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 DUSP28Q4G0W2 176 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 TAPT1Q6NXT6 567 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 NSMFQ6X4W1 530 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 C8orf76Q96K31 380 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 MAF1Q9H063 256 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 SH3GLB2Q9NR46 395 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 THEGQ9P2T0 379 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 MRPL11Q9Y3B7 192 aaKnown RBP13.82□□□□□ -0.2
HDAC7-226ENST00000547259 SLC4A7Q9Y6M7 1214 aa13.82□□□□□ -0.2
HDAC7-226ENST00000547259 PDCP20941 246 aa13.81□□□□□ -0.2
HDAC7-226ENST00000547259 IRX5P78411 483 aaPredicted RBP13.81□□□□□ -0.2
HDAC7-226ENST00000547259 MRPS5P82675 430 aaKnown RBP13.81□□□□□ -0.2
HDAC7-226ENST00000547259 NOC4LQ9BVI4 516 aaKnown RBP13.81□□□□□ -0.2
HDAC7-226ENST00000547259 PRDM12Q9H4Q4 367 aa13.81□□□□□ -0.2
HDAC7-226ENST00000547259 MYH15Q9Y2K3 1946 aa13.81□□□□□ -0.2
HDAC7-226ENST00000547259 ASTN1O14525 1302 aa13.81□□□□□ -0.2
HDAC7-226ENST00000547259 LCTP09848 1927 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 MUC3AQ02505 3323 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 GRXCR1A8MXD5 290 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 H3BQV1 296 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 ACTN1P12814 892 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 RFC2P35250 354 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 PBX2P40425 430 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 ADCY7P51828 1080 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 NLRP5P59047 1200 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 GUCY1B3Q02153 619 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 LARP1BQ659C4 914 aaKnown RBP13.8□□□□□ -0.2
HDAC7-226ENST00000547259 KRT40Q6A162 431 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 TYW1BQ6NUM6 668 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 EEPD1Q7L9B9 569 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 OTOP2Q7RTS6 562 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 FAM177A1Q8N128 213 aaPredicted RBP13.8□□□□□ -0.2
HDAC7-226ENST00000547259 WDR11Q9BZH6 1224 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 C6orf50Q9HD87 102 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 GJB4Q9NTQ9 266 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 KCNJ14Q9UNX9 436 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 PCDHA11Q9Y5I1 949 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 GBF1Q92538 1859 aa13.8□□□□□ -0.2
HDAC7-226ENST00000547259 RBM47A0AV96 593 aaKnown RBP13.79□□□□□ -0.2
HDAC7-226ENST00000547259 ESYT2A0FGR8 921 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 VPS37CA5D8V6 355 aaPredicted RBP13.79□□□□□ -0.2
HDAC7-226ENST00000547259 SMCO2A6NFE2 343 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 B4GALT4O60513 344 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 IGFBP4P22692 258 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 CALML3P27482 149 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 CCL23P55773 120 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 PTPN11Q06124 597 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms