RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 MSL3Q8N5Y2 521 aaKnown RBP18.46■□□□□ 0.55
BRF1-208ENST00000546997 ZNF784Q8NCA9 323 aaPredicted RBP18.46■□□□□ 0.55
BRF1-208ENST00000546997 TBCKQ8TEA7 893 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 XPO4Q9C0E2 1151 aaKnown RBP18.46■□□□□ 0.55
BRF1-208ENST00000546997 TMX1Q9H3N1 280 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 TUBE1Q9UJT0 475 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 ABCB11O95342 1321 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 NFIBO00712 420 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 CBFA2T2O43439 604 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 ALAS1P13196 640 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 TRAF1Q13077 416 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 TMEM132BQ14DG7 1078 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 DPCR1Q3MIW9 517 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 GPAT2Q6NUI2 795 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 ELOA2Q8IYF1 753 aaPredicted RBP18.46■□□□□ 0.55
BRF1-208ENST00000546997 HS6ST3Q8IZP7 471 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 IQUBQ8NA54 791 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 MS4A4AQ96JQ5 239 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 GLT8D2Q9H1C3 349 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 HOXC10Q9NYD6 342 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 MRPL11Q9Y3B7 192 aaKnown RBP18.46■□□□□ 0.55
BRF1-208ENST00000546997 RIPK3Q9Y572 518 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 MYPNQ86TC9 1320 aa18.46■□□□□ 0.55
BRF1-208ENST00000546997 EDIL3O43854 480 aa18.45■□□□□ 0.54
BRF1-208ENST00000546997 CFBP00751 764 aa18.45■□□□□ 0.54
BRF1-208ENST00000546997 FDX1P10109 184 aa18.45■□□□□ 0.54
BRF1-208ENST00000546997 MCM7P33993 719 aa18.45■□□□□ 0.54
BRF1-208ENST00000546997 TRIM65Q6PJ69 517 aa18.45■□□□□ 0.54
BRF1-208ENST00000546997 TMC6Q7Z403 805 aa18.45■□□□□ 0.54
BRF1-208ENST00000546997 SMC1BQ8NDV3 1235 aa18.45■□□□□ 0.54
BRF1-208ENST00000546997 CLEC4DQ8WXI8 215 aa18.45■□□□□ 0.54
BRF1-208ENST00000546997 EXOC4Q96A65 974 aa18.45■□□□□ 0.54
BRF1-208ENST00000546997 ASCC2Q9H1I8 757 aaPredicted RBP18.45■□□□□ 0.54
BRF1-208ENST00000546997 CTDP1Q9Y5B0 961 aaPredicted RBP18.45■□□□□ 0.54
BRF1-208ENST00000546997 PIK3CDO00329 1044 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 BMP15O95972 392 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 SPRYD7Q5W111 196 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 FASTKD5Q7L8L6 764 aaKnown RBP18.44■□□□□ 0.54
BRF1-208ENST00000546997 SAPCD2Q86UD0 394 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 CNNM3Q8NE01 707 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 CSRNP2Q9H175 543 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 IFNKQ9P0W0 207 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 BIN1O00499 593 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 TOMM70O94826 608 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 TUBB4BP68371 445 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 IRX3P78415 501 aaPredicted RBP18.44■□□□□ 0.54
BRF1-208ENST00000546997 PNOCQ13519 176 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 LETM2Q2VYF4 491 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 SNRNP48Q6IEG0 339 aaKnown RBP18.44■□□□□ 0.54
BRF1-208ENST00000546997 NEK8Q86SG6 692 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 ANO3Q9BYT9 981 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 PCNTO95613 3336 aa18.44■□□□□ 0.54
BRF1-208ENST00000546997 SMC2O95347 1197 aa18.43■□□□□ 0.54
BRF1-208ENST00000546997 OAZ1P54368 228 aa18.43■□□□□ 0.54
BRF1-208ENST00000546997 MDM2Q00987 491 aaPredicted RBP18.43■□□□□ 0.54
BRF1-208ENST00000546997 GOLGA5Q8TBA6 731 aa18.43■□□□□ 0.54
BRF1-208ENST00000546997 CCL15-CCL14A0A0B4J2E2 113 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 ATP2A1O14983 1001 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 POLR2DO15514 142 aaKnown RBP18.42■□□□□ 0.54
BRF1-208ENST00000546997 ZBTB48P10074 688 aaPredicted RBP18.42■□□□□ 0.54
BRF1-208ENST00000546997 PTGDRQ13258 359 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 AP3B2Q13367 1082 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 CCL15Q16663 113 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 CC2D1AQ6P1N0 951 aaPredicted RBP18.42■□□□□ 0.54
BRF1-208ENST00000546997 BRI3BPQ8WY22 251 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 TEX13BQ9BXU2 312 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 LCTP09848 1927 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 GCOM1H8Y6P7 765 aaPredicted RBP18.42■□□□□ 0.54
BRF1-208ENST00000546997 CCNT1O60563 726 aaKnown RBP18.42■□□□□ 0.54
BRF1-208ENST00000546997 TBC1D8O95759 1140 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 POLR2MP0CAP2 368 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 GTF2A2P52657 109 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 HERVK_113P62684 666 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 PLS1Q14651 629 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 NCAPHQ15003 741 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 LBX2Q6XYB7 198 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 USP49Q70CQ1 688 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 RABGGTAQ92696 567 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 FERMT2Q96AC1 680 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 TRERF1Q96PN7 1200 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 RASSF4Q9H2L5 321 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 RNF146Q9NTX7 359 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 BTBD7Q9P203 1132 aa18.42■□□□□ 0.54
BRF1-208ENST00000546997 SPDYE3A6NKU9 549 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 TDP2O95551 362 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 CETPP11597 493 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 ATP2C1P98194 919 aaPredicted RBP18.41■□□□□ 0.54
BRF1-208ENST00000546997 RASAL3Q86YV0 1011 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 C4orf32Q8N8J7 132 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 CRYGNQ8WXF5 182 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 ARFGAP3Q9NP61 516 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 HSD17B4P51659 736 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 ZNF157P51786 506 aaPredicted RBP18.41■□□□□ 0.54
BRF1-208ENST00000546997 SMC1AQ14683 1233 aaKnown RBP18.41■□□□□ 0.54
BRF1-208ENST00000546997 ISM2Q6H9L7 571 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 REXO1L1PQ8IX06 675 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 LRRN4CLQ8ND94 238 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 TMEM60Q9H2L4 133 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 COL20A1Q9P218 1284 aa18.41■□□□□ 0.54
BRF1-208ENST00000546997 SERTAD1Q9UHV2 236 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms