RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 SNAP25P60880 206 aa15.46■□□□□ 0.07
RAB5B-203ENST00000546810 CDC37Q16543 378 aaPredicted RBP15.46■□□□□ 0.07
RAB5B-203ENST00000546810 RAB11FIP4Q86YS3 637 aa15.46■□□□□ 0.07
RAB5B-203ENST00000546810 FAM178BQ8IXR5 827 aa15.46■□□□□ 0.07
RAB5B-203ENST00000546810 CHST13Q8NET6 341 aa15.46■□□□□ 0.07
RAB5B-203ENST00000546810 RRP36Q96EU6 259 aaKnown RBP15.46■□□□□ 0.07
RAB5B-203ENST00000546810 FBXL18Q96ME1 805 aa15.46■□□□□ 0.07
RAB5B-203ENST00000546810 KCNH6Q9H252 994 aa15.46■□□□□ 0.07
RAB5B-203ENST00000546810 CPVLQ9H3G5 476 aa15.46■□□□□ 0.07
RAB5B-203ENST00000546810 RIOX1Q9H6W3 641 aa15.46■□□□□ 0.07
RAB5B-203ENST00000546810 JMJD4Q9H9V9 463 aa15.46■□□□□ 0.07
RAB5B-203ENST00000546810 SEC63Q9UGP8 760 aaKnown RBP15.46■□□□□ 0.07
RAB5B-203ENST00000546810 ZBTB5O15062 677 aa15.45■□□□□ 0.06
RAB5B-203ENST00000546810 ALAS1P13196 640 aa15.45■□□□□ 0.06
RAB5B-203ENST00000546810 SMPD1P17405 629 aa15.45■□□□□ 0.06
RAB5B-203ENST00000546810 PTGS1P23219 599 aa15.45■□□□□ 0.06
RAB5B-203ENST00000546810 PDIA3P30101 505 aaKnown RBP15.45■□□□□ 0.06
RAB5B-203ENST00000546810 SSTR3P32745 418 aaPredicted RBP15.45■□□□□ 0.06
RAB5B-203ENST00000546810 AK2P54819 239 aa15.45■□□□□ 0.06
RAB5B-203ENST00000546810 CNTN2Q02246 1040 aa15.45■□□□□ 0.06
RAB5B-203ENST00000546810 TMTC3Q6ZXV5 915 aa15.45■□□□□ 0.06
RAB5B-203ENST00000546810 SPRED2Q7Z698 418 aa15.45■□□□□ 0.06
RAB5B-203ENST00000546810 UBE2ZQ9H832 354 aaPredicted RBP15.45■□□□□ 0.06
RAB5B-203ENST00000546810 TRMT13Q9NUP7 481 aaKnown RBP15.45■□□□□ 0.06
RAB5B-203ENST00000546810 LMCD1Q9NZU5 365 aa15.45■□□□□ 0.06
RAB5B-203ENST00000546810 ZNF536O15090 1300 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 ST18O60284 1047 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 PLEKHA8P1O95397 391 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 RFC2P35250 354 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 QRICH1Q2TAL8 776 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 LEXMQ3ZCV2 418 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 CPLX2Q6PUV4 134 aaKnown RBP15.44■□□□□ 0.06
RAB5B-203ENST00000546810 FBXO11Q86XK2 927 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 HOMER1Q86YM7 354 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 GDPD5Q8WTR4 605 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 TRERF1Q96PN7 1200 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 AMNQ9BXJ7 453 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 ACAD9Q9H845 621 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 RNF146Q9NTX7 359 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 MCM3APO60318 1980 aa15.44■□□□□ 0.06
RAB5B-203ENST00000546810 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.43■□□□□ 0.06
RAB5B-203ENST00000546810 PNMA6FA0A0J9YX94 578 aa15.43■□□□□ 0.06
RAB5B-203ENST00000546810 ASB14A6NK59 587 aa15.43■□□□□ 0.06
RAB5B-203ENST00000546810 SRBD1Q8N5C6 995 aaKnown RBP15.43■□□□□ 0.06
RAB5B-203ENST00000546810 FAM133AQ8N9E0 248 aa15.43■□□□□ 0.06
RAB5B-203ENST00000546810 MTMR8Q96EF0 704 aa15.43■□□□□ 0.06
RAB5B-203ENST00000546810 PIGSQ96S52 555 aa15.43■□□□□ 0.06
RAB5B-203ENST00000546810 KIF2CQ99661 725 aa15.43■□□□□ 0.06
RAB5B-203ENST00000546810 FTOQ9C0B1 505 aaKnown RBP eCLIP15.43■□□□□ 0.06
RAB5B-203ENST00000546810 SLKQ9H2G2 1235 aaPredicted RBP15.43■□□□□ 0.06
RAB5B-203ENST00000546810 HOMER2Q9NSB8 354 aa15.43■□□□□ 0.06
RAB5B-203ENST00000546810 MRPL11Q9Y3B7 192 aaKnown RBP15.43■□□□□ 0.06
RAB5B-203ENST00000546810 Q9Y3F1 56 aa15.43■□□□□ 0.06
RAB5B-203ENST00000546810 NID2Q14112 1375 aa15.43■□□□□ 0.06
RAB5B-203ENST00000546810 ABCB11O95342 1321 aa15.43■□□□□ 0.06
RAB5B-203ENST00000546810 SOWAHBA6NEL2 793 aa15.42■□□□□ 0.06
RAB5B-203ENST00000546810 CPLX1O14810 134 aa15.42■□□□□ 0.06
RAB5B-203ENST00000546810 CYTH3O43739 400 aa15.42■□□□□ 0.06
RAB5B-203ENST00000546810 IL9P15248 144 aa15.42■□□□□ 0.06
RAB5B-203ENST00000546810 KCNA5P22460 613 aa15.42■□□□□ 0.06
RAB5B-203ENST00000546810 ADD1P35611 737 aaKnown RBP15.42■□□□□ 0.06
RAB5B-203ENST00000546810 CCT2P78371 535 aaKnown RBP15.42■□□□□ 0.06
RAB5B-203ENST00000546810 AKAP17AQ02040 695 aaKnown RBP15.42■□□□□ 0.06
RAB5B-203ENST00000546810 USH1GQ495M9 461 aa15.42■□□□□ 0.06
RAB5B-203ENST00000546810 IQSEC1Q6DN90 963 aa15.42■□□□□ 0.06
RAB5B-203ENST00000546810 CMTR1Q8N1G2 835 aaKnown RBP15.42■□□□□ 0.06
RAB5B-203ENST00000546810 CCDC82Q8N4S0 544 aa15.42■□□□□ 0.06
RAB5B-203ENST00000546810 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.42■□□□□ 0.06
RAB5B-203ENST00000546810 LARP6Q9BRS8 491 aaKnown RBP15.42■□□□□ 0.06
RAB5B-203ENST00000546810 MAF1Q9H063 256 aa15.42■□□□□ 0.06
RAB5B-203ENST00000546810 PDGFCQ9NRA1 345 aa15.42■□□□□ 0.06
RAB5B-203ENST00000546810 DCXO43602 365 aa15.41■□□□□ 0.06
RAB5B-203ENST00000546810 CDKL5O76039 1030 aa15.41■□□□□ 0.06
RAB5B-203ENST00000546810 CDC27P30260 824 aa15.41■□□□□ 0.06
RAB5B-203ENST00000546810 STK3Q13188 491 aa15.41■□□□□ 0.06
RAB5B-203ENST00000546810 MCF2L2Q86YR7 1114 aa15.41■□□□□ 0.06
RAB5B-203ENST00000546810 RETREG2Q8NC44 543 aa15.41■□□□□ 0.06
RAB5B-203ENST00000546810 PIBF1Q8WXW3 757 aa15.41■□□□□ 0.06
RAB5B-203ENST00000546810 FAM217BQ9NTX9 383 aaPredicted RBP15.41■□□□□ 0.06
RAB5B-203ENST00000546810 TPCN1Q9ULQ1 816 aa15.41■□□□□ 0.06
RAB5B-203ENST00000546810 LIMCH1Q9UPQ0 1083 aa15.41■□□□□ 0.06
RAB5B-203ENST00000546810 PCDHA1Q9Y5I3 950 aa15.41■□□□□ 0.06
RAB5B-203ENST00000546810 COL4A4P53420 1690 aaPredicted RBP15.41■□□□□ 0.06
RAB5B-203ENST00000546810 LCHNA4D1U4 455 aa15.4■□□□□ 0.06
RAB5B-203ENST00000546810 PFKFB2O60825 505 aa15.4■□□□□ 0.06
RAB5B-203ENST00000546810 BAIAP3O94812 1187 aa15.4■□□□□ 0.06
RAB5B-203ENST00000546810 IQCF3P0C7M6 154 aa15.4■□□□□ 0.06
RAB5B-203ENST00000546810 KCNJ6P48051 423 aa15.4■□□□□ 0.06
RAB5B-203ENST00000546810 SLC35G1Q2M3R5 365 aa15.4■□□□□ 0.06
RAB5B-203ENST00000546810 TMEM63BQ5T3F8 832 aa15.4■□□□□ 0.06
RAB5B-203ENST00000546810 PTCRAQ6ISU1 281 aaPredicted RBP15.4■□□□□ 0.06
RAB5B-203ENST00000546810 TAPT1Q6NXT6 567 aa15.4■□□□□ 0.06
RAB5B-203ENST00000546810 EEPD1Q7L9B9 569 aa15.4■□□□□ 0.06
RAB5B-203ENST00000546810 FBXO16Q8IX29 292 aaPredicted RBP15.4■□□□□ 0.06
RAB5B-203ENST00000546810 TRIM22Q8IYM9 498 aa15.4■□□□□ 0.06
RAB5B-203ENST00000546810 ZSCAN31Q96LW9 406 aaPredicted RBP15.4■□□□□ 0.06
RAB5B-203ENST00000546810 A1CFQ9NQ94 594 aaKnown RBP15.4■□□□□ 0.06
RAB5B-203ENST00000546810 POLR3EQ9NVU0 708 aa15.4■□□□□ 0.06
RAB5B-203ENST00000546810 DDX49Q9Y6V7 483 aaKnown RBP15.4■□□□□ 0.06
RAB5B-203ENST00000546810 hCG_1984214I3L0E3 225 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms