RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 NPM2Q86SE8 214 aaKnown RBP8.72□□□□□ -1.01
CPNE8-204ENST00000546603 DDX11Q96FC9 970 aa8.72□□□□□ -1.01
CPNE8-204ENST00000546603 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.02
CPNE8-204ENST00000546603 FAM153BP0C7A2 387 aa8.71□□□□□ -1.02
CPNE8-204ENST00000546603 VMACQ2NL98 169 aa8.71□□□□□ -1.02
CPNE8-204ENST00000546603 FAM209AQ5JX71 171 aa8.71□□□□□ -1.02
CPNE8-204ENST00000546603 FAM126BQ8IXS8 530 aa8.71□□□□□ -1.02
CPNE8-204ENST00000546603 MARCH10Q8NA82 808 aaPredicted RBP8.71□□□□□ -1.02
CPNE8-204ENST00000546603 PHOSPHO1Q8TCT1 267 aa8.71□□□□□ -1.02
CPNE8-204ENST00000546603 DNAJC2Q99543 621 aaKnown RBP8.71□□□□□ -1.02
CPNE8-204ENST00000546603 YIPF4Q9BSR8 244 aa8.71□□□□□ -1.02
CPNE8-204ENST00000546603 JAM3Q9BX67 310 aa8.71□□□□□ -1.02
CPNE8-204ENST00000546603 SMOC1Q9H4F8 434 aa8.71□□□□□ -1.02
CPNE8-204ENST00000546603 PCDHB4Q9Y5E5 795 aa8.71□□□□□ -1.02
CPNE8-204ENST00000546603 GRK2P25098 689 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 GRK3P35626 688 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 FOXB2Q5VYV0 432 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 CYP4F22Q6NT55 531 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 CD300LDQ6UXZ3 194 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 MAMDC2Q7Z304 686 aaPredicted RBP8.7□□□□□ -1.02
CPNE8-204ENST00000546603 SAPCD2Q86UD0 394 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 PTPRN2Q92932 1015 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 DNAJC7Q99615 494 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 ALG1Q9BT22 464 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 DHRS4Q9BTZ2 278 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 ZCCHC4Q9H5U6 513 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 SLC6A20Q9NP91 592 aa8.7□□□□□ -1.02
CPNE8-204ENST00000546603 AQP7O14520 342 aa8.69□□□□□ -1.02
CPNE8-204ENST00000546603 FFAR3O14843 346 aa8.69□□□□□ -1.02
CPNE8-204ENST00000546603 TRIM13O60858 407 aa8.69□□□□□ -1.02
CPNE8-204ENST00000546603 SASH1O94885 1247 aa8.69□□□□□ -1.02
CPNE8-204ENST00000546603 C8BP07358 591 aa8.69□□□□□ -1.02
CPNE8-204ENST00000546603 DRC1Q96MC2 740 aa8.69□□□□□ -1.02
CPNE8-204ENST00000546603 KCNC2Q96PR1 638 aa8.69□□□□□ -1.02
CPNE8-204ENST00000546603 OSBPL2Q9H1P3 480 aa8.69□□□□□ -1.02
CPNE8-204ENST00000546603 PARD6AQ9NPB6 346 aa8.69□□□□□ -1.02
CPNE8-204ENST00000546603 PPARGC1AQ9UBK2 798 aaKnown RBP8.69□□□□□ -1.02
CPNE8-204ENST00000546603 TCRBV5S2A0A599 114 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 FAM47E-STBD1D6RA91 191 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 NKX3-2P78367 333 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 SPIRE1Q08AE8 756 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 VWA3BQ502W6 1294 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 TTLL10Q6ZVT0 673 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 TRIM48Q8IWZ4 208 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 SP8Q8IXZ3 490 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 LINC00482Q8N8I6 264 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 NOX5Q96PH1 765 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 MYOTQ9UBF9 498 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 RAPGEFL1Q9UHV5 662 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 NUB1Q9Y5A7 615 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 ASXL2Q76L83 1435 aa8.68□□□□□ -1.02
CPNE8-204ENST00000546603 SH3D21A4FU49 640 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 SOD2P04179 222 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 INHBBP09529 407 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 NAT1P18440 290 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 ADAMTS20P59510 1910 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 GABREP78334 506 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 NFE2L2Q16236 605 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 OTOP3Q7RTS5 596 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 FAM26EQ8N5C1 309 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 TP53I13Q8NBR0 393 aaPredicted RBP8.67□□□□□ -1.02
CPNE8-204ENST00000546603 ARRDC4Q8NCT1 418 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 PIP4K2CQ8TBX8 421 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 ZBTB8AQ96BR9 441 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 TOE1Q96GM8 510 aaKnown RBP8.67□□□□□ -1.02
CPNE8-204ENST00000546603 EXOC2Q96KP1 924 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 KCNJ15Q99712 375 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 GORASP1Q9BQQ3 440 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 LUC7LQ9NQ29 371 aaKnown RBP8.67□□□□□ -1.02
CPNE8-204ENST00000546603 MRPS23Q9Y3D9 190 aaKnown RBP8.67□□□□□ -1.02
CPNE8-204ENST00000546603 TRAF6Q9Y4K3 522 aa8.67□□□□□ -1.02
CPNE8-204ENST00000546603 GNAT1P11488 350 aa8.66□□□□□ -1.02
CPNE8-204ENST00000546603 TTLL7Q6ZT98 887 aa8.66□□□□□ -1.02
CPNE8-204ENST00000546603 JMYQ8N9B5 988 aa8.66□□□□□ -1.02
CPNE8-204ENST00000546603 ZNF526Q8TF50 670 aaPredicted RBP8.66□□□□□ -1.02
CPNE8-204ENST00000546603 C11orf84Q9BUA3 381 aaPredicted RBP8.66□□□□□ -1.02
CPNE8-204ENST00000546603 DTLQ9NZJ0 730 aa8.66□□□□□ -1.02
CPNE8-204ENST00000546603 ASH2LQ9UBL3 628 aa8.66□□□□□ -1.02
CPNE8-204ENST00000546603 CCDC163A0A0D9SF12 145 aa8.65□□□□□ -1.02
CPNE8-204ENST00000546603 SMARCA5O60264 1052 aaPredicted RBP8.65□□□□□ -1.02
CPNE8-204ENST00000546603 C6orf222P0C671 652 aaPredicted RBP8.65□□□□□ -1.02
CPNE8-204ENST00000546603 STAT5AP42229 794 aa8.65□□□□□ -1.02
CPNE8-204ENST00000546603 PAK1Q13153 545 aa8.65□□□□□ -1.02
CPNE8-204ENST00000546603 CR1LQ2VPA4 569 aa8.65□□□□□ -1.02
CPNE8-204ENST00000546603 LIPIQ6XZB0 460 aa8.65□□□□□ -1.02
CPNE8-204ENST00000546603 MTDHQ86UE4 582 aaKnown RBP8.65□□□□□ -1.02
CPNE8-204ENST00000546603 TTLL6Q8N841 843 aa8.65□□□□□ -1.02
CPNE8-204ENST00000546603 KYQ8NBH2 561 aa8.65□□□□□ -1.02
CPNE8-204ENST00000546603 THAP3Q8WTV1 239 aaPredicted RBP8.65□□□□□ -1.02
CPNE8-204ENST00000546603 UBXN4Q92575 508 aa8.65□□□□□ -1.02
CPNE8-204ENST00000546603 KISS1RQ969F8 398 aaPredicted RBP8.65□□□□□ -1.02
CPNE8-204ENST00000546603 NTMQ9P121 344 aa8.65□□□□□ -1.02
CPNE8-204ENST00000546603 COL6A2P12110 1019 aa8.64□□□□□ -1.03
CPNE8-204ENST00000546603 KCNC1P48547 511 aa8.64□□□□□ -1.03
CPNE8-204ENST00000546603 SLURP1P55000 103 aa8.64□□□□□ -1.03
CPNE8-204ENST00000546603 DLX2Q07687 328 aaPredicted RBP8.64□□□□□ -1.03
CPNE8-204ENST00000546603 ZSWIM2Q8NEG5 633 aa8.64□□□□□ -1.03
CPNE8-204ENST00000546603 IPPKQ9H8X2 491 aa8.64□□□□□ -1.03
CPNE8-204ENST00000546603 CDK11AQ9UQ88 783 aaPredicted RBP8.64□□□□□ -1.03
CPNE8-204ENST00000546603 SLC27A2O14975 620 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms