RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 UTYO14607 1347 aa8.24□□□□□ -1.09
CCDC60-205ENST00000546345 CNTNAP5Q8WYK1 1306 aa8.24□□□□□ -1.09
CCDC60-205ENST00000546345 TANC1Q9C0D5 1861 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 PIK3R2O00459 728 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 CTNND1O60716 968 aaKnown RBP8.23□□□□□ -1.09
CCDC60-205ENST00000546345 LILRB5O75023 590 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 CYBAP13498 195 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 MRE11P49959 708 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 SPP2Q13103 211 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 PDE3AQ14432 1141 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 CCDC85BQ15834 202 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-205ENST00000546345 PERM1Q5SV97 790 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 GJC2Q5T442 439 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-205ENST00000546345 GPR142Q7Z601 462 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 NCAPG2Q86XI2 1143 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 IDI2Q9BXS1 227 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 PBX4Q9BYU1 374 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 JPH1Q9HDC5 661 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-205ENST00000546345 FRRS1LQ9P0K9 344 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 FOXD3Q9UJU5 478 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-205ENST00000546345 NAGPAQ9UK23 515 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 GAKO14976 1311 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 KIF16BQ96L93 1317 aa8.23□□□□□ -1.09
CCDC60-205ENST00000546345 GRXCR1A8MXD5 290 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 FGFR2P21802 821 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 RGS2P41220 211 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 HERVK_113P62684 666 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 GNAI1P63096 354 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 CCDC57Q2TAC2 916 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 LRRC24Q50LG9 513 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 TMEM31Q5JXX7 168 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 LINC00114Q6XXX2 140 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 ZSCAN29Q8IWY8 852 aaPredicted RBP8.22□□□□□ -1.09
CCDC60-205ENST00000546345 LPIN3Q9BQK8 851 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 NIF3L1Q9GZT8 377 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 SMG9Q9H0W8 520 aaKnown RBP8.22□□□□□ -1.09
CCDC60-205ENST00000546345 CHRDQ9H2X0 955 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 KANSL3Q9P2N6 904 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 RBPJLQ9UBG7 517 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 NOP58Q9Y2X3 529 aaKnown RBP8.22□□□□□ -1.09
CCDC60-205ENST00000546345 SPTBN4Q9H254 2564 aa8.22□□□□□ -1.09
CCDC60-205ENST00000546345 PLXNA3P51805 1871 aa8.21□□□□□ -1.09
CCDC60-205ENST00000546345 NAV1Q8NEY1 1877 aa8.21□□□□□ -1.09
CCDC60-205ENST00000546345 DCHS1Q96JQ0 3298 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 ENTPD3O75355 529 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 CNMDO75829 334 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 KIF4AO95239 1232 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 MAPK4P31152 587 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 ERVK-24P63145 666 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 JAG1P78504 1218 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 SHROOM1Q2M3G4 852 aaPredicted RBP8.21□□□□□ -1.1
CCDC60-205ENST00000546345 TAF7LQ5H9L4 462 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 BEND3Q5T5X7 828 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 RASIP1Q5U651 963 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 C8orf86Q6ZUL3 223 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 TMC7Q7Z402 723 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 TTC9Q92623 222 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 TSR2Q969E8 191 aaKnown RBP8.21□□□□□ -1.1
CCDC60-205ENST00000546345 PLD4Q96BZ4 506 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 P2RX7Q99572 595 aaKnown RBP8.21□□□□□ -1.1
CCDC60-205ENST00000546345 USP40Q9NVE5 1235 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 SALL4Q9UJQ4 1053 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 LRRFIP2Q9Y608 721 aaKnown RBP8.21□□□□□ -1.1
CCDC60-205ENST00000546345 SIP14410 1827 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 MROH5Q6ZUA9 1318 aa8.21□□□□□ -1.1
CCDC60-205ENST00000546345 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.2□□□□□ -1.1
CCDC60-205ENST00000546345 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.2□□□□□ -1.1
CCDC60-205ENST00000546345 F6X3S4 739 aa8.2□□□□□ -1.1
CCDC60-205ENST00000546345 RNF225M0QZC1 329 aaPredicted RBP8.2□□□□□ -1.1
CCDC60-205ENST00000546345 GRM8O00222 908 aa8.2□□□□□ -1.1
CCDC60-205ENST00000546345 GNB5O14775 395 aa8.2□□□□□ -1.1
CCDC60-205ENST00000546345 EREGO14944 169 aa8.2□□□□□ -1.1
CCDC60-205ENST00000546345 KIAA0355O15063 1070 aa8.2□□□□□ -1.1
CCDC60-205ENST00000546345 HOXA7P31268 230 aaPredicted RBP8.2□□□□□ -1.1
CCDC60-205ENST00000546345 CYP2C19P33261 490 aa8.2□□□□□ -1.1
CCDC60-205ENST00000546345 ANP32AP39687 249 aaKnown RBP8.2□□□□□ -1.1
CCDC60-205ENST00000546345 TLE2Q04725 743 aa8.2□□□□□ -1.1
CCDC60-205ENST00000546345 ANO1Q5XXA6 986 aa8.2□□□□□ -1.1
CCDC60-205ENST00000546345 VPS37DQ86XT2 251 aa8.2□□□□□ -1.1
CCDC60-205ENST00000546345 GPRC5AQ8NFJ5 357 aa8.2□□□□□ -1.1
CCDC60-205ENST00000546345 NPLOC4Q8TAT6 608 aa8.2□□□□□ -1.1
CCDC60-205ENST00000546345 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCDC60-205ENST00000546345 GPR182O15218 404 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 MSCO60682 206 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 FRAT2O75474 233 aaPredicted RBP8.19□□□□□ -1.1
CCDC60-205ENST00000546345 PDE8BO95263 885 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 CLTBP09497 229 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 HOXC6P09630 235 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 IRX3P78415 501 aaPredicted RBP8.19□□□□□ -1.1
CCDC60-205ENST00000546345 PLCB3Q01970 1234 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 NHLH1Q02575 133 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 FPGSQ05932 587 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 PABPC4Q13310 644 aaKnown RBP eCLIP8.19□□□□□ -1.1
CCDC60-205ENST00000546345 CAVIN4Q5BKX8 364 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 FAM47AQ5JRC9 791 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 C16orf59Q7L2K0 433 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 PLEKHH3Q7Z736 793 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 CEP120Q8N960 986 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 ALKBH8Q96BT7 664 aaKnown RBP8.19□□□□□ -1.1
CCDC60-205ENST00000546345 SUCLG2Q96I99 432 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms