RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 EPSTI1Q96J88 318 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 CRACR2AQ9BSW2 395 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 ZNF287Q9HBT7 754 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 PDE11AQ9HCR9 933 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 ST7Q9NRC1 585 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 TCP11L1Q9NUJ3 509 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 EXOC1Q9NV70 894 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 KBTBD4Q9NVX7 518 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 TMEM51Q9NW97 253 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 VPS54Q9P1Q0 977 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 FEZ2Q9UHY8 353 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 PCDHA4Q9UN74 947 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 FCF1Q9Y324 198 aaKnown RBP7.21□□□□□ -1.26
SNHG1-225ENST00000545920 JRKLQ9Y4A0 524 aa7.21□□□□□ -1.26
SNHG1-225ENST00000545920 DUOX1Q9NRD9 1551 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 ECM29Q5VYK3 1845 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 A0A087X0B3 334 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 GOLGA8KD6RF30 607 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 H3BQF6 201 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 MYO1CO00159 1063 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 OPA1O60313 960 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 SHOX2O60902 331 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-225ENST00000545920 TACC1O75410 805 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 LCA5LO95447 670 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 CPP00450 1065 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 EPB41P11171 864 aaKnown RBP7.2□□□□□ -1.26
SNHG1-225ENST00000545920 GPTP24298 496 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 CCNE1P24864 410 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 UBA7P41226 1012 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 VAV2P52735 878 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 VSNL1P62760 191 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 GOLGA8FQ08AF8 430 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 GOLGA8DPQ0D2H9 430 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 KIF5AQ12840 1032 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 PPFIA1Q13136 1202 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 MTF1Q14872 753 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 SEPT2Q15019 361 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 SPA17Q15506 151 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 C4orf48Q5BLP8 95 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 SPECC1Q5M775 1068 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 FKBP15Q5T1M5 1219 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 EMBQ6PCB8 327 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 KRT25Q7Z3Z0 450 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 EFCAB13Q8IY85 973 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 SEPT12Q8IYM1 358 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 GRAMD1CQ8IYS0 662 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 BLIDQ8IZY5 108 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 RNF10Q8N5U6 811 aaKnown RBP7.2□□□□□ -1.26
SNHG1-225ENST00000545920 C4orf32Q8N8J7 132 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 NEK11Q8NG66 645 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 SYTL4Q96C24 671 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-225ENST00000545920 ALS2CR12Q96Q35 445 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 PNKPQ96T60 521 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 C7orf25Q9BPX7 421 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 TTYH3Q9C0H2 523 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 CCDC87Q9NVE4 849 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 BSDC1Q9NW68 430 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-225ENST00000545920 VPS18Q9P253 973 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 FAM184BQ9ULE4 1060 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 ASAP1Q9ULH1 1129 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 RRP15Q9Y3B9 282 aaKnown RBP7.2□□□□□ -1.26
SNHG1-225ENST00000545920 TACC3Q9Y6A5 838 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 ATP8B3O60423 1300 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 ROBO3Q96MS0 1386 aa7.2□□□□□ -1.26
SNHG1-225ENST00000545920 TOGARAM1Q9Y4F4 1720 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 LAMB2P55268 1798 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 CCDC194A0A1B0GVG4 234 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 PVALEFA0A1B0GWK0 134 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 TTC26A0AVF1 554 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 ESYT2A0FGR8 921 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 M0R2N6 131 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 CES2O00748 559 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 PRKAB2O43741 272 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 ZEB2O60315 1214 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 ANXA13P27216 316 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 PRCPP42785 496 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 MARSP56192 900 aaKnown RBP7.19□□□□□ -1.26
SNHG1-225ENST00000545920 STX17P56962 302 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 ST5P78524 1137 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 CHRNDQ07001 517 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 PSMD2Q13200 908 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 ZNF174Q15697 407 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 LINC01559Q495D7 138 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 DNAJC21Q5F1R6 531 aaKnown RBP7.19□□□□□ -1.26
SNHG1-225ENST00000545920 CCDC122Q5T0U0 273 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 TTI2Q6NXR4 508 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 USP49Q70CQ1 688 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 KIAA1328Q86T90 577 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 ANKRD18AQ8IVF6 992 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 ZNF511Q8NB15 262 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 BAP1Q92560 729 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 SYN2Q92777 582 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-225ENST00000545920 SMARCC1Q92922 1105 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-225ENST00000545920 JAKMIP2Q96AA8 810 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 TRIM47Q96LD4 638 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 ANKRD2Q9GZV1 360 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 PUF60Q9UHX1 559 aaKnown RBP7.19□□□□□ -1.26
SNHG1-225ENST00000545920 ZBTB1Q9Y2K1 713 aa7.19□□□□□ -1.26
SNHG1-225ENST00000545920 THRAP3Q9Y2W1 955 aaKnown RBP7.19□□□□□ -1.26
SNHG1-225ENST00000545920 DLEC1Q9Y238 1755 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms