RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 CSF2RAP15509 400 aa19.46■□□□□ 0.71
HOXD8-204ENST00000544999 METAP2P50579 478 aaKnown RBP eCLIP19.46■□□□□ 0.71
HOXD8-204ENST00000544999 SP2Q02086 613 aa19.46■□□□□ 0.71
HOXD8-204ENST00000544999 WWC2Q6AWC2 1192 aa19.46■□□□□ 0.71
HOXD8-204ENST00000544999 PPP1R18Q6NYC8 613 aa19.46■□□□□ 0.71
HOXD8-204ENST00000544999 ZNF713Q8N859 430 aaPredicted RBP19.46■□□□□ 0.71
HOXD8-204ENST00000544999 KAT2BQ92831 832 aa19.46■□□□□ 0.71
HOXD8-204ENST00000544999 GPKOWQ92917 476 aaPredicted RBP eCLIP19.46■□□□□ 0.71
HOXD8-204ENST00000544999 BRF1Q92994 677 aa19.46■□□□□ 0.71
HOXD8-204ENST00000544999 RNPC3Q96LT9 517 aaKnown RBP19.46■□□□□ 0.71
HOXD8-204ENST00000544999 KATNAL1Q9BW62 490 aa19.46■□□□□ 0.71
HOXD8-204ENST00000544999 USP26Q9BXU7 913 aa19.46■□□□□ 0.71
HOXD8-204ENST00000544999 SESTD1Q86VW0 696 aa19.45■□□□□ 0.7
HOXD8-204ENST00000544999 TEX2Q8IWB9 1127 aa19.45■□□□□ 0.7
HOXD8-204ENST00000544999 SPATA33Q96N06 139 aa19.45■□□□□ 0.7
HOXD8-204ENST00000544999 MLXIPQ9HAP2 919 aa19.45■□□□□ 0.7
HOXD8-204ENST00000544999 V9GY48 417 aaPredicted RBP19.45■□□□□ 0.7
HOXD8-204ENST00000544999 UMODL1Q5DID0 1318 aa19.45■□□□□ 0.7
HOXD8-204ENST00000544999 SPATA31C2B4DYI2 1134 aa19.44■□□□□ 0.7
HOXD8-204ENST00000544999 FIBPO43427 364 aa19.44■□□□□ 0.7
HOXD8-204ENST00000544999 NAPAP54920 295 aa19.44■□□□□ 0.7
HOXD8-204ENST00000544999 SEMA3FQ13275 785 aa19.44■□□□□ 0.7
HOXD8-204ENST00000544999 NEDD9Q14511 834 aa19.44■□□□□ 0.7
HOXD8-204ENST00000544999 UBE2SQ16763 222 aa19.44■□□□□ 0.7
HOXD8-204ENST00000544999 HSDL1Q3SXM5 330 aa19.44■□□□□ 0.7
HOXD8-204ENST00000544999 TMEM240Q5SV17 173 aa19.44■□□□□ 0.7
HOXD8-204ENST00000544999 PSRC1Q6PGN9 363 aaPredicted RBP19.44■□□□□ 0.7
HOXD8-204ENST00000544999 NLRX1Q86UT6 975 aa19.44■□□□□ 0.7
HOXD8-204ENST00000544999 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.44■□□□□ 0.7
HOXD8-204ENST00000544999 IL23AQ9NPF7 189 aa19.44■□□□□ 0.7
HOXD8-204ENST00000544999 RTEL1Q9NZ71 1219 aa19.44■□□□□ 0.7
HOXD8-204ENST00000544999 SPDYE3A6NKU9 549 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 PPFIA4O75335 1185 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 F2P00734 622 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 CYP2C9P11712 490 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 ADD1P35611 737 aaKnown RBP19.43■□□□□ 0.7
HOXD8-204ENST00000544999 PSEN2P49810 448 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 CCL23P55773 120 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 SMAD3P84022 425 aaKnown RBP19.43■□□□□ 0.7
HOXD8-204ENST00000544999 FAM109BQ6ICB4 259 aaPredicted RBP19.43■□□□□ 0.7
HOXD8-204ENST00000544999 RUFY3Q7L099 469 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 C16orf59Q7L2K0 433 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 PPP1R13LQ8WUF5 828 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 WNT8AQ9H1J5 351 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 EHMT1Q9H9B1 1298 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 ZSWIM6Q9HCJ5 1215 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 RIC8AQ9NPQ8 531 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 BARHL2Q9NY43 387 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 PCDHA6Q9UN73 950 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 PCDHA8Q9Y5H6 950 aa19.43■□□□□ 0.7
HOXD8-204ENST00000544999 STXBP3O00186 592 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 HAS3O00219 553 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 SORBS3O60504 671 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 ZNF286BP0CG31 522 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 ACRP10323 421 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 CHMP4BP1P59074 171 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 MFSD10Q14728 455 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 TYW1BQ6NUM6 668 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 METTL7BQ6UX53 244 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 DEFB123Q8N688 67 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 GPRASP2Q96D09 838 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 SENP7Q9BQF6 1050 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 TM6SF1Q9BZW5 370 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 GLT8D2Q9H1C3 349 aa19.42■□□□□ 0.7
HOXD8-204ENST00000544999 ADCY7P51828 1080 aa19.41■□□□□ 0.7
HOXD8-204ENST00000544999 EVCP57679 992 aa19.41■□□□□ 0.7
HOXD8-204ENST00000544999 PFKFB3Q16875 520 aaPredicted RBP19.41■□□□□ 0.7
HOXD8-204ENST00000544999 ZNF365Q70YC5 407 aa19.41■□□□□ 0.7
HOXD8-204ENST00000544999 Q7L0L9 218 aa19.41■□□□□ 0.7
HOXD8-204ENST00000544999 CDHR1Q96JP9 859 aa19.41■□□□□ 0.7
HOXD8-204ENST00000544999 ALG1Q9BT22 464 aa19.41■□□□□ 0.7
HOXD8-204ENST00000544999 GTF2IRD1Q9UHL9 959 aa19.41■□□□□ 0.7
HOXD8-204ENST00000544999 NOD1Q9Y239 953 aa19.41■□□□□ 0.7
HOXD8-204ENST00000544999 DOCK5Q9H7D0 1870 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 SMCO2A6NFE2 343 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 PITPNM1O00562 1244 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 NOP56O00567 594 aaKnown RBP19.4■□□□□ 0.7
HOXD8-204ENST00000544999 FOSP01100 380 aaPredicted RBP19.4■□□□□ 0.7
HOXD8-204ENST00000544999 BFSP2Q13515 415 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 PTGISQ16647 500 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 KIAA0753Q2KHM9 967 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 RASIP1Q5U651 963 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 GDF6Q6KF10 455 aaPredicted RBP19.4■□□□□ 0.7
HOXD8-204ENST00000544999 CYFIP1Q7L576 1253 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 RPUSD2Q8IZ73 545 aaKnown RBP19.4■□□□□ 0.7
HOXD8-204ENST00000544999 C7orf31Q8N865 590 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 HERVK_113Q902F9 699 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 SCLYQ96I15 445 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 C16orf70Q9BSU1 422 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 BCAS3Q9H6U6 928 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 HDAC6Q9UBN7 1215 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 UBIAD1Q9Y5Z9 338 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 CYP46A1Q9Y6A2 500 aa19.4■□□□□ 0.7
HOXD8-204ENST00000544999 LAMA3Q16787 3333 aa19.39■□□□□ 0.69
HOXD8-204ENST00000544999 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.39■□□□□ 0.69
HOXD8-204ENST00000544999 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.39■□□□□ 0.69
HOXD8-204ENST00000544999 PRPF3O43395 683 aaKnown RBP19.39■□□□□ 0.69
HOXD8-204ENST00000544999 FGBP02675 491 aa19.39■□□□□ 0.69
HOXD8-204ENST00000544999 SCG2P13521 617 aa19.39■□□□□ 0.69
HOXD8-204ENST00000544999 ITGB5P18084 799 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms