RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 UBA1P22314 1058 aaKnown RBP13.12□□□□□ -0.31
YBX3-216ENST00000544622 CCT2P78371 535 aaKnown RBP13.12□□□□□ -0.31
YBX3-216ENST00000544622 HSDL1Q3SXM5 330 aa13.12□□□□□ -0.31
YBX3-216ENST00000544622 LRIT3Q3SXY7 679 aa13.12□□□□□ -0.31
YBX3-216ENST00000544622 GNPTABQ3T906 1256 aa13.12□□□□□ -0.31
YBX3-216ENST00000544622 NFRKBQ6P4R8 1299 aa13.12□□□□□ -0.31
YBX3-216ENST00000544622 DHX37Q8IY37 1157 aaKnown RBP13.12□□□□□ -0.31
YBX3-216ENST00000544622 TDHQ8IZJ6 230 aa13.12□□□□□ -0.31
YBX3-216ENST00000544622 SENP7Q9BQF6 1050 aa13.12□□□□□ -0.31
YBX3-216ENST00000544622 RNF26Q9BY78 433 aaPredicted RBP13.12□□□□□ -0.31
YBX3-216ENST00000544622 UBE2OQ9C0C9 1292 aaKnown RBP13.12□□□□□ -0.31
YBX3-216ENST00000544622 ZMYND12Q9H0C1 365 aa13.12□□□□□ -0.31
YBX3-216ENST00000544622 PRDM5Q9NQX1 630 aaPredicted RBP13.12□□□□□ -0.31
YBX3-216ENST00000544622 PDRG1Q9NUG6 133 aa13.12□□□□□ -0.31
YBX3-216ENST00000544622 RTEL1Q9NZ71 1219 aa13.12□□□□□ -0.31
YBX3-216ENST00000544622 SCN10AQ9Y5Y9 1956 aa13.12□□□□□ -0.31
YBX3-216ENST00000544622 ESYT2A0FGR8 921 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 FIBPO43427 364 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 B4GALT4O60513 344 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 FOSP01100 380 aaPredicted RBP13.11□□□□□ -0.31
YBX3-216ENST00000544622 MYL3P08590 195 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 NAPAP54920 295 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 DGKDQ16760 1214 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 C8orf34Q49A92 452 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 CRYGNQ8WXF5 182 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 PHKBQ93100 1093 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
YBX3-216ENST00000544622 LARP6Q9BRS8 491 aaKnown RBP13.11□□□□□ -0.31
YBX3-216ENST00000544622 GLT8D2Q9H1C3 349 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 TRPV6Q9H1D0 765 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 NCOA5Q9HCD5 579 aaKnown RBP13.11□□□□□ -0.31
YBX3-216ENST00000544622 NAP1L2Q9ULW6 460 aaPredicted RBP13.11□□□□□ -0.31
YBX3-216ENST00000544622 UBIAD1Q9Y5Z9 338 aa13.11□□□□□ -0.31
YBX3-216ENST00000544622 SPDYE3A6NKU9 549 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 HAS3O00219 553 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 ADAMTS3O15072 1205 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 MAFGO15525 162 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 ATP9AO75110 1047 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 GGPS1O95749 300 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 F2P00734 622 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 RAG1P15918 1043 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 PTPN11Q06124 597 aaPredicted RBP13.1□□□□□ -0.31
YBX3-216ENST00000544622 NEDD9Q14511 834 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 MFSD5Q6N075 450 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 METTL7BQ6UX53 244 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 SESTD1Q86VW0 696 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 GPRASP2Q96D09 838 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 CTAGE1Q96RT6 745 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 C16orf70Q9BSU1 422 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 TPCN1Q9ULQ1 816 aa13.1□□□□□ -0.31
YBX3-216ENST00000544622 SOX1O00570 391 aaPredicted RBP13.09□□□□□ -0.31
YBX3-216ENST00000544622 TLR3O15455 904 aaKnown RBP13.09□□□□□ -0.31
YBX3-216ENST00000544622 SLC34A2O95436 690 aa13.09□□□□□ -0.31
YBX3-216ENST00000544622 KCNA2P16389 499 aa13.09□□□□□ -0.31
YBX3-216ENST00000544622 ADCY7P51828 1080 aa13.09□□□□□ -0.31
YBX3-216ENST00000544622 EPHB4P54760 987 aa13.09□□□□□ -0.31
YBX3-216ENST00000544622 SCRN1Q12765 414 aa13.09□□□□□ -0.31
YBX3-216ENST00000544622 AP3B2Q13367 1082 aa13.09□□□□□ -0.31
YBX3-216ENST00000544622 C16orf59Q7L2K0 433 aa13.09□□□□□ -0.31
YBX3-216ENST00000544622 JADE2Q9NQC1 790 aa13.09□□□□□ -0.31
YBX3-216ENST00000544622 TRMT13Q9NUP7 481 aaKnown RBP13.09□□□□□ -0.31
YBX3-216ENST00000544622 TELO2Q9Y4R8 837 aa13.09□□□□□ -0.31
YBX3-216ENST00000544622 PFKFB2O60825 505 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 PPFIA3O75145 1194 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 SUPT20HL2P0C7V6 817 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 SREBF1P36956 1147 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 SHHQ15465 462 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 C9orf50Q5SZB4 431 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 CYFIP1Q7L576 1253 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 NLRX1Q86UT6 975 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 CYP2W1Q8TAV3 490 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 VWCEQ96DN2 955 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 CDHR1Q96JP9 859 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 SPATA33Q96N06 139 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 GPR20Q99678 358 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 NOC4LQ9BVI4 516 aaKnown RBP13.08□□□□□ -0.32
YBX3-216ENST00000544622 SLC26A6Q9BXS9 759 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 MLXIPQ9HAP2 919 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 SH3GLB2Q9NR46 395 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 TMEM260Q9NX78 707 aa13.08□□□□□ -0.32
YBX3-216ENST00000544622 M0R2N6 131 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 MEIS1O00470 390 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 EDIL3O43854 480 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 CYP3A4P08684 503 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 GNA11P29992 359 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 HOXC8P31273 242 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 AK2P54819 239 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 MTMR1Q13613 665 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 ANKRD1Q15327 319 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 GIMAP8Q8ND71 665 aaPredicted RBP13.07□□□□□ -0.32
YBX3-216ENST00000544622 CCDC12Q8WUD4 166 aaPredicted RBP13.07□□□□□ -0.32
YBX3-216ENST00000544622 PPP1R13LQ8WUF5 828 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 KIF2CQ99661 725 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 MXRA8Q9BRK3 442 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 ANO3Q9BYT9 981 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 HIPK3Q9H422 1215 aa13.07□□□□□ -0.32
YBX3-216ENST00000544622 C6orf50Q9HD87 102 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms