RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 SLC1A4P43007 532 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 GNAQP50148 359 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 NUCB2P80303 420 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 TFAP4Q01664 338 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 ITGA7Q13683 1181 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 ADGRE1Q14246 886 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 WTAPQ15007 396 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 RAB30Q15771 203 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 FSCN1Q16658 493 aaKnown RBP7.6□□□□□ -1.19
CDCA3-209ENST00000544610 TMEM67Q5HYA8 995 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 APOA5Q6Q788 366 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 CXCL17Q6UXB2 119 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 ENAHQ8N8S7 591 aaPredicted RBP7.6□□□□□ -1.19
CDCA3-209ENST00000544610 CHURC1Q8WUH1 139 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 ATXN2LQ8WWM7 1075 aaKnown RBP7.6□□□□□ -1.19
CDCA3-209ENST00000544610 BRF1Q92994 677 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 GTF3C6Q969F1 213 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 TRERF1Q96PN7 1200 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 LZTS2Q9BRK4 669 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 SLKQ9H2G2 1235 aaPredicted RBP7.6□□□□□ -1.19
CDCA3-209ENST00000544610 MTIF3Q9H2K0 278 aaKnown RBP7.6□□□□□ -1.19
CDCA3-209ENST00000544610 HIPK3Q9H422 1215 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 PRDM12Q9H4Q4 367 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 RBM28Q9NW13 759 aaKnown RBP7.6□□□□□ -1.19
CDCA3-209ENST00000544610 CYP39A1Q9NYL5 469 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 CXXC1Q9P0U4 656 aaPredicted RBP7.6□□□□□ -1.19
CDCA3-209ENST00000544610 TPCN1Q9ULQ1 816 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 Q9Y3F1 56 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 SLC12A7Q9Y666 1083 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 TNKSO95271 1327 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 UMODL1Q5DID0 1318 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 STK36Q9NRP7 1315 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 CCDC69A6NI79 296 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 ZBTB43O43298 467 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 ZEB2O60315 1214 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 B4GALT4O60513 344 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 FGBP02675 491 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 TOP1P11387 765 aaKnown RBP7.59□□□□□ -1.19
CDCA3-209ENST00000544610 ALAS1P13196 640 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 PTGS1P23219 599 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 TROAPQ12815 778 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 IKQ13123 557 aaPredicted RBP7.59□□□□□ -1.19
CDCA3-209ENST00000544610 PTGDRQ13258 359 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 ME3Q16798 604 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 IFIT1BQ5T764 474 aaKnown RBP7.59□□□□□ -1.19
CDCA3-209ENST00000544610 IQSEC1Q6DN90 963 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 TAPT1Q6NXT6 567 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 KCTD1Q719H9 257 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 NOL8Q76FK4 1167 aaKnown RBP7.59□□□□□ -1.19
CDCA3-209ENST00000544610 CYB5R4Q7L1T6 521 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 CATIPQ7Z7H3 387 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 FBXO16Q8IX29 292 aaPredicted RBP7.59□□□□□ -1.19
CDCA3-209ENST00000544610 SMARCC2Q8TAQ2 1214 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 MORC4Q8TE76 937 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 CCDC97Q96F63 343 aaPredicted RBP7.59□□□□□ -1.19
CDCA3-209ENST00000544610 ASB2Q96Q27 587 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 NOC4LQ9BVI4 516 aaKnown RBP7.59□□□□□ -1.19
CDCA3-209ENST00000544610 AP5M1Q9H0R1 490 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 WNT8AQ9H1J5 351 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 VTA1Q9NP79 307 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 PDGFCQ9NRA1 345 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 IL17RBQ9NRM6 502 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 THEGQ9P2T0 379 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 MSRAQ9UJ68 235 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 PRR12Q9ULL5 1215 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 ISY1Q9ULR0 285 aaKnown RBP7.59□□□□□ -1.19
CDCA3-209ENST00000544610 STX8Q9UNK0 236 aa7.59□□□□□ -1.19
CDCA3-209ENST00000544610 YBX2Q9Y2T7 364 aaKnown RBP7.59□□□□□ -1.19
CDCA3-209ENST00000544610 DDX49Q9Y6V7 483 aaKnown RBP7.59□□□□□ -1.19
CDCA3-209ENST00000544610 LOC102724159A0A0B4J2E5 919 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 DYNC1LI2O43237 492 aaPredicted RBP7.58□□□□□ -1.2
CDCA3-209ENST00000544610 ICAM1P05362 532 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 IFNAR1P17181 557 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 CLCN1P35523 988 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 CCL23P55773 120 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 PWP2Q15269 919 aaKnown RBP7.58□□□□□ -1.2
CDCA3-209ENST00000544610 DUSP28Q4G0W2 176 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 MUM1L1Q5H9M0 696 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 TMEM63BQ5T3F8 832 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 CLEC17AQ6ZS10 378 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 RASGRP2Q7LDG7 609 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 OTOP2Q7RTS6 562 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 ZNF654Q8IZM8 581 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 PPM1EQ8WY54 764 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 WASF1Q92558 559 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 VWCEQ96DN2 955 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 TRPV6Q9H1D0 765 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 RANBP17Q9H2T7 1088 aaKnown RBP7.58□□□□□ -1.2
CDCA3-209ENST00000544610 NKX2-4Q9H2Z4 354 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 SLC28A3Q9HAS3 691 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 TOMM22Q9NS69 142 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 CHMP5Q9NZZ3 219 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 CCPG1Q9ULG6 757 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 LCTP09848 1927 aa7.58□□□□□ -1.2
CDCA3-209ENST00000544610 MCM3APO60318 1980 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 KLF18A0A0U1RQI7 1052 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 CPLX1O14810 134 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 NMT2O60551 498 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 PFKMP08237 780 aa7.57□□□□□ -1.2
CDCA3-209ENST00000544610 SNHG28P0DPA3 235 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms