RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 FAM13BQ9NYF5 915 aa11.4□□□□□ -0.58
MDH1-216ENST00000544381 SRPRBQ9Y5M8 271 aaKnown RBP11.4□□□□□ -0.58
MDH1-216ENST00000544381 MORC2Q9Y6X9 1032 aaPredicted RBP11.4□□□□□ -0.58
MDH1-216ENST00000544381 CUL9Q8IWT3 2517 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 H0YGN5 161 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 CTAGE5O15320 804 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 CTGFP29279 349 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 IREB2P48200 963 aaKnown RBP11.39□□□□□ -0.59
MDH1-216ENST00000544381 SPP2Q13103 211 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 MTMR2Q13614 643 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 CAMK4Q16566 473 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 AMHR2Q16671 573 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 USH1GQ495M9 461 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 NOL9Q5SY16 702 aaKnown RBP11.39□□□□□ -0.59
MDH1-216ENST00000544381 ZNF280CQ8ND82 737 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.39□□□□□ -0.599e-8■■□□□ 12.8
MDH1-216ENST00000544381 CLIC6Q96NY7 704 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 TSPY26PQ9H489 355 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 TMEM260Q9NX78 707 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 FBXO2Q9UK22 296 aaPredicted RBP11.39□□□□□ -0.59
MDH1-216ENST00000544381 ZHX2Q9Y6X8 837 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 ALPK3Q96L96 1907 aa11.39□□□□□ -0.59
MDH1-216ENST00000544381 FSD2A1L4K1 749 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 C19orf81C9J6K1 198 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 PFKFB1P16118 471 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 SSTR3P32745 418 aaPredicted RBP11.38□□□□□ -0.59
MDH1-216ENST00000544381 SYKP43405 635 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 NDUFA8P51970 172 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 BACE1P56817 501 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 ATP2C1P98194 919 aaPredicted RBP11.38□□□□□ -0.59
MDH1-216ENST00000544381 SNW1Q13573 536 aaKnown RBP11.38□□□□□ -0.59
MDH1-216ENST00000544381 VGLL4Q14135 290 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 LETM2Q2VYF4 491 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 RESP18Q5W5W9 173 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 MCTP2Q6DN12 878 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 CCDC174Q6PII3 467 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 SHC4Q6S5L8 630 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 RNF19BQ6ZMZ0 732 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 Q6ZNB5 142 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 LIAT1Q6ZQX7 453 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 NEK8Q86SG6 692 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 FMR1NBQ8N0W7 255 aaPredicted RBP11.38□□□□□ -0.59
MDH1-216ENST00000544381 PRPF38AQ8NAV1 312 aaKnown RBP11.38□□□□□ -0.59
MDH1-216ENST00000544381 ENGASEQ8NFI3 743 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 TBCKQ8TEA7 893 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 SLF1Q9BQI6 1058 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 SDF4Q9BRK5 362 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 TANGO6Q9C0B7 1094 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 RANBP17Q9H2T7 1088 aaKnown RBP11.38□□□□□ -0.59
MDH1-216ENST00000544381 PRO3102Q9H379 93 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 CTDP1Q9Y5B0 961 aaPredicted RBP11.38□□□□□ -0.59
MDH1-216ENST00000544381 CSADQ9Y600 493 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 MGAMO43451 1857 aa11.38□□□□□ -0.59
MDH1-216ENST00000544381 LAD1O00515 517 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 WNT7AO00755 349 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 CCNT1O60563 726 aaKnown RBP11.37□□□□□ -0.59
MDH1-216ENST00000544381 ZNF202O95125 648 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 MRE11P49959 708 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 ORC2Q13416 577 aaPredicted RBP11.37□□□□□ -0.59
MDH1-216ENST00000544381 UBE2SQ16763 222 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 ARL6IP4Q66PJ3 421 aaKnown RBP11.37□□□□□ -0.59
MDH1-216ENST00000544381 UBE2Q1Q7Z7E8 422 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 GAS2L3Q86XJ1 694 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 SH3TC2Q8TF17 1288 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 RPAP3Q9H6T3 665 aaPredicted RBP11.37□□□□□ -0.59
MDH1-216ENST00000544381 FBXO28Q9NVF7 368 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 TMOD4Q9NZQ9 345 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 MRVI1Q9Y6F6 885 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 SNCAIPQ9Y6H5 919 aa11.37□□□□□ -0.59
MDH1-216ENST00000544381 CCL15-CCL14A0A0B4J2E2 113 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 FAM237AA0A1B0GTK4 181 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 VWA3AA6NCI4 1184 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 HOXA2O43364 376 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 FLOT1O75955 427 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 CCDC192P0DO97 292 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 VCAM1P19320 739 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 CLK2P49760 499 aaKnown RBP11.36□□□□□ -0.59
MDH1-216ENST00000544381 AP3B2Q13367 1082 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 TAF1CQ15572 869 aaPredicted RBP11.36□□□□□ -0.59
MDH1-216ENST00000544381 CCL15Q16663 113 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 SLC9C1Q4G0N8 1177 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 SPECC1Q5M775 1068 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 TEX2Q8IWB9 1127 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 CKAP2LQ8IYA6 745 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 TIGD1Q96MW7 591 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 NAP1L4Q99733 375 aaKnown RBP11.36□□□□□ -0.59
MDH1-216ENST00000544381 CSRNP2Q9H175 543 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 GRPEL1Q9HAV7 217 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 KCNH3Q9ULD8 1083 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 HPSEQ9Y251 543 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 MRPL11Q9Y3B7 192 aaKnown RBP11.36□□□□□ -0.59
MDH1-216ENST00000544381 ABCB11O95342 1321 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 ADGRA2Q96PE1 1338 aa11.36□□□□□ -0.59
MDH1-216ENST00000544381 SPDYE5A6NIY4 337 aa11.35□□□□□ -0.59
MDH1-216ENST00000544381 SPDYE3A6NKU9 549 aa11.35□□□□□ -0.59
MDH1-216ENST00000544381 USP17L15C9J2P7 530 aa11.35□□□□□ -0.59
MDH1-216ENST00000544381 USP17L13C9JLJ4 530 aa11.35□□□□□ -0.59
MDH1-216ENST00000544381 USP17L11C9JVI0 530 aa11.35□□□□□ -0.59
MDH1-216ENST00000544381 USP17L18D6R9N7 530 aa11.35□□□□□ -0.59
MDH1-216ENST00000544381 USP17L22D6RA61 530 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms