RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 DDX25Q9UHL0 483 aaKnown RBP11.24□□□□□ -0.61
PCDH9-204ENST00000544246 PFKFB1P16118 471 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 PTK2BQ14289 1009 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 NT5C1BQ96P26 610 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 SUGCTQ9HAC7 445 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 SUN2Q9UH99 717 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 CSADQ9Y600 493 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 PPIP5K1Q6PFW1 1433 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 PTPRMP28827 1452 aa11.24□□□□□ -0.61
PCDH9-204ENST00000544246 PLS3P13797 630 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 EPHB1P54762 984 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 SKOR1P84550 965 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 ABI1Q8IZP0 508 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 SPATA5Q8NB90 893 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 MAML1Q92585 1016 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 USP6NLQ92738 828 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 APOL6Q9BWW8 343 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 PSTPIP2Q9H939 334 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 L3MBTL1Q9Y468 752 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 LRRIQ4A6NIV6 560 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 TFAP4Q01664 338 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 MRPL28Q13084 256 aaKnown RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 CAPRIN1Q14444 709 aaKnown RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 EXOC3L4Q17RC7 722 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 MTHFSDQ2M296 383 aaKnown RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 FAM173BQ6P4H8 233 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 KRT27Q7Z3Y8 459 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 N4BP2L2Q92802 583 aaPredicted RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 DCAF5Q96JK2 942 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 MMTAG2Q9BU76 263 aaKnown RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 RRAGDQ9NQL2 400 aaPredicted RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 EFCAB6Q5THR3 1501 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 HDAC4P56524 1084 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 BLIDQ8IZY5 108 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 ENOX1Q8TC92 643 aaKnown RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 CCDC127Q96BQ5 260 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 GTPBP6O43824 516 aaPredicted RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 RPN1P04843 607 aaKnown RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 SERPINB2P05120 415 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 GUCY2CP25092 1073 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 CARSP49589 748 aaKnown RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 KRT26Q7Z3Y9 468 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 SZRD1Q7Z422 152 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 STX19Q8N4C7 294 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 KCTD6Q8NC69 237 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 MTBPQ96DY7 904 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 ING2Q9H160 280 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 SLC4A7Q9Y6M7 1214 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 IQANK1A0A1B0GTG1 560 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 H0YIN7 160 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 TADA3O75528 432 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 PMLP29590 882 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 BASP1P80723 227 aaKnown RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 FAM47AQ5JRC9 791 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 ADALQ6DHV7 355 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 FRA10AC1Q70Z53 315 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 PATL1Q86TB9 770 aaKnown RBP11.23□□□□□ -0.61
PCDH9-204ENST00000544246 PLBD2Q8NHP8 589 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 GSDMAQ96QA5 445 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 ZSCAN32Q9NX65 697 aa11.23□□□□□ -0.61
PCDH9-204ENST00000544246 hCG_1642624A0A1W2PR95 340 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 ZNF263O14978 683 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 ANP32DO95626 131 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 PMS1P54277 932 aaKnown RBP11.22□□□□□ -0.61
PCDH9-204ENST00000544246 IGBP1P78318 339 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 CYP4F22Q6NT55 531 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 TRPV6Q9H1D0 765 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 PCDHA12Q9UN75 941 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 SUGT1Q9Y2Z0 365 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 MED7O43513 233 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 OR52Z1P0C646 297 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 ALAS1P13196 640 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 PABPC4Q13310 644 aaKnown RBP eCLIP11.22□□□□□ -0.61
PCDH9-204ENST00000544246 TEDDM1Q5T9Z0 273 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 ZNF653Q96CK0 615 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 FNDC3AQ9Y2H6 1198 aaKnown RBP11.22□□□□□ -0.61
PCDH9-204ENST00000544246 SAMD9LQ8IVG5 1584 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 MAPK13O15264 365 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 TMCC1O94876 653 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 NFKBIAP25963 317 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 TIMM10P62072 90 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 PPARAQ07869 468 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 DLGAP5Q15398 846 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 CCDC92Q53HC0 331 aaPredicted RBP11.22□□□□□ -0.61
PCDH9-204ENST00000544246 NDUFAF2Q8N183 169 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 TEX9Q8N6V9 391 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 LPIN2Q92539 896 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 CYTH2Q99418 400 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 ATP8A1Q9Y2Q0 1164 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 A0A087WUV0 522 aaPredicted RBP11.22□□□□□ -0.61
PCDH9-204ENST00000544246 RASGRF2O14827 1237 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 HSPA4LO95757 839 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 SLMAPQ14BN4 828 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 TEKT4Q8WW24 435 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 EXT2Q93063 718 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 FAM81BQ96LP2 452 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
PCDH9-204ENST00000544246 MROH5Q6ZUA9 1318 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms