RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 VPS16Q9H269 839 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 ZHX3Q9H4I2 956 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 ELP3Q9H9T3 547 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 DACH1Q9UI36 760 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 USP27XA6NNY8 438 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 SPATA31C1P0DKV0 1188 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 ITGB5P18084 799 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 TMEM119Q4V9L6 283 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 SPATA1Q5VX52 437 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 APTXQ7Z2E3 356 aaKnown RBP15.32■□□□□ 0.04
HCFC2-202ENST00000544223 SULF1Q8IWU6 871 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.32■□□□□ 0.04
HCFC2-202ENST00000544223 TRERF1Q96PN7 1200 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 EXOC1Q9NV70 894 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 VAV3Q9UKW4 847 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 CTDP1Q9Y5B0 961 aaPredicted RBP15.32■□□□□ 0.04
HCFC2-202ENST00000544223 SNCAIPQ9Y6H5 919 aa15.32■□□□□ 0.04
HCFC2-202ENST00000544223 FOSP01100 380 aaPredicted RBP15.31■□□□□ 0.04
HCFC2-202ENST00000544223 MYCLP12524 364 aaPredicted RBP15.31■□□□□ 0.04
HCFC2-202ENST00000544223 ERCC5P28715 1186 aaPredicted RBP15.31■□□□□ 0.04
HCFC2-202ENST00000544223 CDC25BP30305 580 aa15.31■□□□□ 0.04
HCFC2-202ENST00000544223 TTLL12Q14166 644 aaPredicted RBP15.31■□□□□ 0.04
HCFC2-202ENST00000544223 Q4G0T1 1027 aa15.31■□□□□ 0.04
HCFC2-202ENST00000544223 CEP135Q66GS9 1140 aa15.31■□□□□ 0.04
HCFC2-202ENST00000544223 ADSSL1Q8N142 457 aa15.31■□□□□ 0.04
HCFC2-202ENST00000544223 CPLX3Q8WVH0 158 aa15.31■□□□□ 0.04
HCFC2-202ENST00000544223 TAB2Q9NYJ8 693 aa15.31■□□□□ 0.04
HCFC2-202ENST00000544223 RHOBTB3O94955 611 aa15.31■□□□□ 0.04
HCFC2-202ENST00000544223 TMEM132BQ14DG7 1078 aa15.31■□□□□ 0.04
HCFC2-202ENST00000544223 SNRNP48Q6IEG0 339 aaKnown RBP15.31■□□□□ 0.04
HCFC2-202ENST00000544223 GIMAP8Q8ND71 665 aaPredicted RBP15.31■□□□□ 0.04
HCFC2-202ENST00000544223 OTUD5Q96G74 571 aa15.31■□□□□ 0.04
HCFC2-202ENST00000544223 C7orf25Q9BPX7 421 aa15.31■□□□□ 0.04
HCFC2-202ENST00000544223 PYM1Q9BRP8 204 aaKnown RBP15.31■□□□□ 0.04
HCFC2-202ENST00000544223 WRAP73Q9P2S5 460 aaPredicted RBP15.31■□□□□ 0.04
HCFC2-202ENST00000544223 RLFQ13129 1914 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 ADKP55263 362 aaKnown RBP15.3■□□□□ 0.04
HCFC2-202ENST00000544223 ORC2Q13416 577 aaPredicted RBP15.3■□□□□ 0.04
HCFC2-202ENST00000544223 NOLC1Q14978 699 aaKnown RBP eCLIP15.3■□□□□ 0.04
HCFC2-202ENST00000544223 ANKRD40Q6AI12 368 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 IRF2BP1Q8IU81 584 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 KIAA1524Q8TCG1 905 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 TELO2Q9Y4R8 837 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 AFG3L2Q9Y4W6 797 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 SFI1A8K8P3 1242 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 ZNF500O60304 480 aaPredicted RBP15.3■□□□□ 0.04
HCFC2-202ENST00000544223 PLA2G6O60733 806 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 PLA2G4BP0C869 781 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 SKILP12757 684 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 CEP55Q53EZ4 464 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 ARSHQ5FYA8 562 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 LRCH2Q5VUJ6 765 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 TPH2Q8IWU9 490 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 SYTL5Q8TDW5 730 aaPredicted RBP15.3■□□□□ 0.04
HCFC2-202ENST00000544223 ZNF408Q9H9D4 720 aa15.3■□□□□ 0.04
HCFC2-202ENST00000544223 TRMT1Q9NXH9 659 aaKnown RBP15.3■□□□□ 0.04
HCFC2-202ENST00000544223 PARP14Q460N5 1801 aa15.29■□□□□ 0.04
HCFC2-202ENST00000544223 PES1O00541 588 aaKnown RBP15.29■□□□□ 0.04
HCFC2-202ENST00000544223 IRF6O14896 467 aa15.29■□□□□ 0.04
HCFC2-202ENST00000544223 MRPS9P82933 396 aaKnown RBP15.29■□□□□ 0.04
HCFC2-202ENST00000544223 BAATQ14032 418 aaPredicted RBP15.29■□□□□ 0.04
HCFC2-202ENST00000544223 SUPT20HL1Q3ZLR7 823 aa15.29■□□□□ 0.04
HCFC2-202ENST00000544223 CDKAL1Q5VV42 579 aa15.29■□□□□ 0.04
HCFC2-202ENST00000544223 GPBP1Q86WP2 473 aa15.29■□□□□ 0.04
HCFC2-202ENST00000544223 SRRTQ9BXP5 876 aaKnown RBP15.29■□□□□ 0.04
HCFC2-202ENST00000544223 RMND1Q9NWS8 449 aa15.29■□□□□ 0.04
HCFC2-202ENST00000544223 RSPH10B2B2RC85 870 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 RSPH10BP0C881 870 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 CIITAP33076 1130 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 HSD17B4P51659 736 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 CCZ1BP86790 482 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 CCZ1P86791 482 aaPredicted RBP15.28■□□□□ 0.04
HCFC2-202ENST00000544223 KRT31Q15323 416 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 SLFN12Q8IYM2 578 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 BANK1Q8NDB2 785 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 DNAJC19Q96DA6 116 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 DYDC2Q96IM9 177 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 EIF2AK1Q9BQI3 630 aaKnown RBP15.28■□□□□ 0.04
HCFC2-202ENST00000544223 ZNF577Q9BSK1 485 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 IKZF4Q9H2S9 585 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 BMP2KQ9NSY1 1161 aaPredicted RBP15.28■□□□□ 0.04
HCFC2-202ENST00000544223 RNF146Q9NTX7 359 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 RWDD2AQ9UIY3 292 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 TMEM150BA6NC51 233 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 TRAF5O00463 557 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 CYP3A4P08684 503 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 EPHX2P34913 555 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 USP14P54578 494 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 MKRN3Q13064 507 aaKnown RBP15.28■□□□□ 0.04
HCFC2-202ENST00000544223 OTOP1Q7RTM1 612 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 VSTM4Q8IW00 320 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 TRIM47Q96LD4 638 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 BHMT2Q9H2M3 363 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 SEMA6BQ9H3T3 888 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 UNC45AQ9H3U1 944 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 OTOFQ9HC10 1997 aa15.28■□□□□ 0.04
HCFC2-202ENST00000544223 ZBED4O75132 1171 aa15.27■□□□□ 0.04
HCFC2-202ENST00000544223 FSTL1Q12841 308 aa15.27■□□□□ 0.04
HCFC2-202ENST00000544223 GPIHBP1Q8IV16 184 aa15.27■□□□□ 0.04
HCFC2-202ENST00000544223 NELFCDQ8IXH7 590 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms