RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 TNRQ92752 1358 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 SRRM3A6NNA2 597 aaPredicted RBP13.91□□□□□ -0.18
SMG8-202ENST00000543872 DAPK3O43293 454 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 PECAM1P16284 738 aaPredicted RBP13.91□□□□□ -0.18
SMG8-202ENST00000543872 CCNE1P24864 410 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 KCNJ2P63252 427 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 DHX9Q08211 1270 aaKnown RBP13.91□□□□□ -0.18
SMG8-202ENST00000543872 GNPTABQ3T906 1256 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 TRIM68Q6AZZ1 485 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 LRIG3Q6UXM1 1119 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 PAIP2Q9BPZ3 127 aaKnown RBP13.91□□□□□ -0.18
SMG8-202ENST00000543872 PYM1Q9BRP8 204 aaKnown RBP13.91□□□□□ -0.18
SMG8-202ENST00000543872 NACAP1Q9BZK3 213 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 EBF2Q9HAK2 575 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 DISC1Q9NRI5 854 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 H0YGN5 161 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 KLRC1P26715 233 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 RAB27AP51159 221 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 CDK17Q00537 523 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 CCDC113Q9H0I3 377 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 GOPCQ9HD26 462 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 NFS1Q9Y697 457 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.18
SMG8-202ENST00000543872 TRIM74Q86UV6 250 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 TRIM73Q86UV7 250 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 DNAAF5Q86Y56 855 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 GIMAP8Q8ND71 665 aaPredicted RBP13.9□□□□□ -0.18
SMG8-202ENST00000543872 UHMK1Q8TAS1 419 aaKnown RBP13.9□□□□□ -0.18
SMG8-202ENST00000543872 ERGIC2Q96RQ1 377 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 ISCUQ9H1K1 167 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 NDST4Q9H3R1 872 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 RNF14Q9UBS8 474 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 TSKSQ9UJT2 592 aa13.9□□□□□ -0.18
SMG8-202ENST00000543872 C5orf60A6NFR6 353 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 A8MUI8 341 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 KLRC4O43908 158 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 NAALADL2Q58DX5 795 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 MIS18BP1Q6P0N0 1132 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 LCORLQ8N3X6 602 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 ATP8A1Q9Y2Q0 1164 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 FAM170AA1A519 330 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 PCCAP05165 728 aaPredicted RBP13.89□□□□□ -0.19
SMG8-202ENST00000543872 MMEP08473 750 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 GHRP10912 638 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 KIAA0753Q2KHM9 967 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 DTHD1Q6ZMT9 781 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 CATIPQ7Z7H3 387 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 USP38Q8NB14 1042 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 DHTKD1Q96HY7 919 aaPredicted RBP13.89□□□□□ -0.19
SMG8-202ENST00000543872 PSMD1Q99460 953 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 SAMD15Q9P1V8 674 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 SWAP70Q9UH65 585 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 RGPD2P0DJD1 1756 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 BICDL2A1A5D9 508 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 PHKG2P15735 406 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 CHN1P15882 459 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 ITGA6P23229 1130 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 ARMC9Q7Z3E5 817 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 LRRC34Q8IZ02 419 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 TBC1D5Q92609 795 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 ABCF3Q9NUQ8 709 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 AGAP1Q9UPQ3 857 aa13.89□□□□□ -0.19
SMG8-202ENST00000543872 EVI5O60447 810 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 MAP3K12Q12852 859 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 RPS6KA1Q15418 735 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 VWA3BQ502W6 1294 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 IFIT1BQ5T764 474 aaKnown RBP13.88□□□□□ -0.19
SMG8-202ENST00000543872 TAX1BP1Q86VP1 789 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 C1orf131Q8NDD1 294 aaKnown RBP13.88□□□□□ -0.19
SMG8-202ENST00000543872 P3H4Q92791 437 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 PACSIN1Q9BY11 444 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 AMACRQ9UHK6 382 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 THRAP3Q9Y2W1 955 aaKnown RBP13.88□□□□□ -0.19
SMG8-202ENST00000543872 SPATA31A3Q5VYP0 1347 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 A0A1W2PQJ5 194 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 SART1O43290 800 aaKnown RBP13.88□□□□□ -0.19
SMG8-202ENST00000543872 PRPF3O43395 683 aaKnown RBP13.88□□□□□ -0.19
SMG8-202ENST00000543872 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 SDR42E1Q8WUS8 393 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 INPP4AQ96PE3 977 aaPredicted RBP13.88□□□□□ -0.19
SMG8-202ENST00000543872 BCL9LQ86UU0 1499 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 SMNDC1O75940 238 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMG8-202ENST00000543872 RHOBTB3O94955 611 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 ALDH5A1P51649 535 aaPredicted RBP13.88□□□□□ -0.19
SMG8-202ENST00000543872 ALX1Q15699 326 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 ERICH1Q86X53 443 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 RPUSD2Q8IZ73 545 aaKnown RBP13.88□□□□□ -0.19
SMG8-202ENST00000543872 MTMR7Q9Y216 660 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 MYH6P13533 1939 aa13.88□□□□□ -0.19
SMG8-202ENST00000543872 RICTORQ6R327 1708 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 TCRBV5S4A2TA0A5A2 114 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 LONP1P36776 959 aaKnown RBP13.87□□□□□ -0.19
SMG8-202ENST00000543872 NPY5RQ15761 445 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 AGBL2Q5U5Z8 902 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 TRPM8Q7Z2W7 1104 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 RNF10Q8N5U6 811 aaKnown RBP13.87□□□□□ -0.19
SMG8-202ENST00000543872 KLHL23Q8NBE8 558 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 TTLL11Q8NHH1 800 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 ADAMTS1Q9UHI8 967 aa13.87□□□□□ -0.19
SMG8-202ENST00000543872 AFDNP55196 1824 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms