RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 MAN2A1Q16706 1144 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 ZCWPW2Q504Y3 356 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 POTEBQ6S5H4 581 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 ZNF662Q6ZS27 426 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 CEP112Q8N8E3 955 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 ZSWIM4Q9H7M6 989 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 NHEJ1Q9H9Q4 299 aaPredicted RBP17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 PANK4Q9NVE7 773 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 TFRCP02786 760 aaKnown RBP17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 SYDE2Q5VT97 1194 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 TMCO3Q6UWJ1 677 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 FBXO11Q86XK2 927 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 MYOCDQ8IZQ8 938 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 ETNPPLQ8TBG4 499 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 PARD6BQ9BYG5 372 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 ZNHIT6Q9NWK9 470 aaKnown RBP17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 PUF60Q9UHX1 559 aaKnown RBP17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 TFR2Q9UP52 801 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 PCDHA2Q9Y5H9 948 aa17.88■□□□□ 0.45
SCNN1A-221ENST00000543768 TNS1Q9HBL0 1735 aaKnown RBP17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 A0A1W2PRG0 241 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 SLC26A4O43511 780 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 PLA2G4BP0C869 781 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 PNMA6AP0CW24 399 aaPredicted RBP17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 STAT3P40763 770 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 MMP14P50281 582 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 CDK17Q00537 523 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 AMPD2Q01433 879 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 SPIRE1Q08AE8 756 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 RBM26Q5T8P6 1007 aaKnown RBP17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 ZNF772Q68DY9 489 aaPredicted RBP17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 SLFN12Q8IYM2 578 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 CCDC170Q8IYT3 715 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 FGFBP2Q9BYJ0 223 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 SMCHD1A6NHR9 2005 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 EIF3CLB5ME19 914 aaKnown RBP17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 EPHB6O15197 1021 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 MED24O75448 989 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 SSBP05455 408 aaKnown RBP eCLIP17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 BMP3P12645 472 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 CYLC1P35663 651 aaPredicted RBP17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 KRT83P78385 493 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 USH1GQ495M9 461 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 FAM26FQ5R3K3 315 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 BTNL9Q6UXG8 535 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 LENG9Q96B70 501 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 IQCDQ96DY2 449 aa17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 EIF3CQ99613 913 aaKnown RBP17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 BMP2KQ9NSY1 1161 aaPredicted RBP17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 COL2A1P02458 1487 aaPredicted RBP17.87■□□□□ 0.45
SCNN1A-221ENST00000543768 SEC31AO94979 1220 aaKnown RBP17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 CYP11B2P19099 503 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 HNRNPH3P31942 346 aaKnown RBP17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 CC2D2BQ6DHV5 1058 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 CSRNP1Q96S65 589 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 TSG101Q99816 390 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 PLAGL2Q9UPG8 496 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 PSME4Q14997 1843 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 NPHP3-ACAD11A0A0J9YXS1 232 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 RCCD1A6NED2 376 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 PSMD14O00487 310 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 OPLAHO14841 1288 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 TAL1P17542 331 aaPredicted RBP17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 Q4G0T1 1027 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 CCDC122Q5T0U0 273 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 MCTP2Q6DN12 878 aa17.86■□□□□ 0.45
SCNN1A-221ENST00000543768 SREBF1P36956 1147 aa17.85■□□□□ 0.45
SCNN1A-221ENST00000543768 SLC12A3P55017 1021 aa17.85■□□□□ 0.45
SCNN1A-221ENST00000543768 IKQ13123 557 aaPredicted RBP17.85■□□□□ 0.45
SCNN1A-221ENST00000543768 PRR16Q569H4 304 aa17.85■□□□□ 0.45
SCNN1A-221ENST00000543768 ARSHQ5FYA8 562 aa17.85■□□□□ 0.45
SCNN1A-221ENST00000543768 CC2D1AQ6P1N0 951 aaPredicted RBP17.85■□□□□ 0.45
SCNN1A-221ENST00000543768 GPBP1Q86WP2 473 aa17.85■□□□□ 0.45
SCNN1A-221ENST00000543768 LACRTQ9GZZ8 138 aa17.85■□□□□ 0.45
SCNN1A-221ENST00000543768 FAM86B1E9PN63 330 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 TBX3O15119 743 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 PPIP5K2O43314 1243 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 FAM86B2P0C5J1 330 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 FKBP3Q00688 224 aaKnown RBP17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 TERF2Q15554 542 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 WHAMMP3Q1A5X7 153 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 CCDC84Q86UT8 332 aaPredicted RBP17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 CCDC65Q8IXS2 484 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 FAM207AQ9NSI2 230 aaPredicted RBP17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 TBC1D7Q9P0N9 293 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 MYO6Q9UM54 1294 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 FRMD3A2A2Y4 597 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 CCDC66A2RUB6 948 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 FOSP01100 380 aaPredicted RBP17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 ERCC3P19447 782 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 CATSPER3Q86XQ3 398 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 ANKZF1Q9H8Y5 726 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 RGPD3A6NKT7 1758 aaPredicted RBP17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 RGPD4Q7Z3J3 1758 aa17.84■□□□□ 0.45
SCNN1A-221ENST00000543768 POTEFA5A3E0 1075 aa17.83■□□□□ 0.45
SCNN1A-221ENST00000543768 SPDYE3A6NKU9 549 aa17.83■□□□□ 0.45
SCNN1A-221ENST00000543768 ZNF263O14978 683 aa17.83■□□□□ 0.45
SCNN1A-221ENST00000543768 PLEKP08567 350 aaPredicted RBP17.83■□□□□ 0.45
SCNN1A-221ENST00000543768 POTEIP0CG38 1075 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms