RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 E2F4Q16254 413 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 NUDCD1Q96RS6 583 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 MTRQ99707 1265 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 DIABLOQ9NR28 239 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 SEMA3EO15041 775 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 MAPK4P31152 587 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 MRPL28Q13084 256 aaKnown RBP20.88■□□□□ 0.93
HDAC4-215ENST00000543185 SERTAD1Q9UHV2 236 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 ZNF654Q8IZM8 581 aa20.88■□□□□ 0.93
HDAC4-215ENST00000543185 AP1B1Q10567 949 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 KRT28Q7Z3Y7 464 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 PARD6BQ9BYG5 372 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 PKD2L1Q9P0L9 805 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 ADAM21Q9UKJ8 722 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 SMCO2A6NFE2 343 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 ITGA6P23229 1130 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 FKBP3Q00688 224 aaKnown RBP20.87■□□□□ 0.93
HDAC4-215ENST00000543185 KIF17Q9P2E2 1029 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 H7C0C1 242 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 STXBP3O00186 592 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 IL2RBP14784 551 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 ATP2B4P23634 1241 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 NFKBIAP25963 317 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 ATP5OP48047 213 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 PLTPP55058 493 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 ACAD11Q709F0 780 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 C19orf44Q9H6X5 657 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 RTCBQ9Y3I0 505 aaKnown RBP20.87■□□□□ 0.93
HDAC4-215ENST00000543185 TARSL2A2RTX5 802 aaKnown RBP20.87■□□□□ 0.93
HDAC4-215ENST00000543185 SERPINB4P48594 390 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 KRT38O76015 456 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 SF3A3Q12874 501 aaKnown RBP eCLIP20.87■□□□□ 0.931e-6■■■■■ 34
HDAC4-215ENST00000543185 PARP9Q8IXQ6 854 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 THAP9Q9H5L6 903 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 ZFP69BQ9UJL9 534 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 DEAF1O75398 565 aaPredicted RBP20.87■□□□□ 0.93
HDAC4-215ENST00000543185 SLFN14P0C7P3 912 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 RHOT2Q8IXI1 618 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 PPM1KQ8N3J5 372 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 FAM227BQ96M60 508 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 ZBTB18Q99592 522 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 SLC5A4Q9NY91 659 aa20.87■□□□□ 0.93
HDAC4-215ENST00000543185 OCRLQ01968 901 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 VSTM4Q8IW00 320 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 SYMPKQ92797 1274 aaKnown RBP20.86■□□□□ 0.93
HDAC4-215ENST00000543185 TBC1D23Q9NUY8 699 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 CPA1P15085 419 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 LRRC63Q05C16 580 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 PSMD2Q13200 908 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 DEPDC1BQ8WUY9 529 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 TRPC5Q9UL62 973 aaPredicted RBP20.86■□□□□ 0.93
HDAC4-215ENST00000543185 UBE4BO95155 1302 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 TAF1BQ53T94 588 aaPredicted RBP20.86■□□□□ 0.93
HDAC4-215ENST00000543185 CDV3Q9UKY7 258 aaKnown RBP20.86■□□□□ 0.93
HDAC4-215ENST00000543185 A0A1W2PP64 1363 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 CCDC78A2IDD5 438 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 C1orf146Q5VVC0 180 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 NELFCDQ8IXH7 590 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 GTPBP10A4D1E9 387 aaKnown RBP20.86■□□□□ 0.93
HDAC4-215ENST00000543185 NPR1P16066 1061 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 RNF169Q8NCN4 708 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 BPIFA3Q9BQP9 254 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 WARS2Q9UGM6 360 aaKnown RBP20.86■□□□□ 0.93
HDAC4-215ENST00000543185 SEPT3Q9UH03 358 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 IVNS1ABPQ9Y6Y0 642 aa20.86■□□□□ 0.93
HDAC4-215ENST00000543185 GRID2IPA4D2P6 1211 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 TOM1L1O75674 476 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 ZBED6P86452 979 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 KAZNQ674X7 775 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 DYDC2Q96IM9 177 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 PSTPIP2Q9H939 334 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 RNF123Q5XPI4 1314 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 SH3TC1Q8TE82 1336 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 H0Y626 953 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 ZBED4O75132 1171 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 TRIM16O95361 564 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 AFPP02771 609 aaKnown RBP20.85■□□□□ 0.93
HDAC4-215ENST00000543185 ANXA1P04083 346 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 KIRREL3Q8IZU9 778 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 TJP3O95049 919 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 PLS3P13797 630 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 TFAP4Q01664 338 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 TCP11X2Q5H9J9 407 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 VPS39Q96JC1 886 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 ARMT1Q9H993 441 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 MYOM2P54296 1465 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 SAT1P21673 171 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 STX18Q9P2W9 335 aaKnown RBP20.85■□□□□ 0.93
HDAC4-215ENST00000543185 GRIN1Q05586 938 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 FBXO38Q6PIJ6 1188 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 NT5C1BQ96P26 610 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 NCF2P19878 526 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-215ENST00000543185 PSMC2P35998 433 aaKnown RBP20.85■□□□□ 0.93
HDAC4-215ENST00000543185 ZNF658Q5TYW1 1059 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-215ENST00000543185 ARHGEF25Q86VW2 580 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 ATP6V1E2Q96A05 226 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 ZNF212Q9UDV6 495 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 MYH7P12883 1935 aa20.85■□□□□ 0.93
HDAC4-215ENST00000543185 EPM2AIP1Q7L775 607 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-215ENST00000543185 TMCC1O94876 653 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms