RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 TGFB3P10600 412 aa20.18■□□□□ 0.82
PPP1CA-210ENST00000542876 GRM4Q14833 912 aa20.18■□□□□ 0.82
PPP1CA-210ENST00000542876 WTAPQ15007 396 aa20.18■□□□□ 0.82
PPP1CA-210ENST00000542876 MYSM1Q5VVJ2 828 aa20.18■□□□□ 0.82
PPP1CA-210ENST00000542876 FCHSD1Q86WN1 690 aa20.18■□□□□ 0.82
PPP1CA-210ENST00000542876 PIGSQ96S52 555 aa20.18■□□□□ 0.82
PPP1CA-210ENST00000542876 MLXIPQ9HAP2 919 aa20.18■□□□□ 0.82
PPP1CA-210ENST00000542876 SCN5AQ14524 2016 aa20.18■□□□□ 0.82
PPP1CA-210ENST00000542876 PNMA6FA0A0J9YX94 578 aa20.17■□□□□ 0.82
PPP1CA-210ENST00000542876 ABHD14A-ACY1A0A1B0GW23 586 aa20.17■□□□□ 0.82
PPP1CA-210ENST00000542876 HAS3O00219 553 aa20.17■□□□□ 0.82
PPP1CA-210ENST00000542876 RGS20O76081 388 aa20.17■□□□□ 0.82
PPP1CA-210ENST00000542876 CXCL10P02778 98 aa20.17■□□□□ 0.82
PPP1CA-210ENST00000542876 CYP21A2P08686 494 aa20.17■□□□□ 0.82
PPP1CA-210ENST00000542876 GSPT1P15170 499 aaKnown RBP20.17■□□□□ 0.82
PPP1CA-210ENST00000542876 IKBKEQ14164 716 aa20.17■□□□□ 0.82
PPP1CA-210ENST00000542876 NCOA7Q8NI08 942 aa20.17■□□□□ 0.82
PPP1CA-210ENST00000542876 RIOX1Q9H6W3 641 aa20.17■□□□□ 0.82
PPP1CA-210ENST00000542876 TANC1Q9C0D5 1861 aa20.16■□□□□ 0.82
PPP1CA-210ENST00000542876 NBNO60934 754 aa20.16■□□□□ 0.82
PPP1CA-210ENST00000542876 HOXD8P13378 290 aaPredicted RBP20.16■□□□□ 0.82
PPP1CA-210ENST00000542876 UBA1P22314 1058 aaKnown RBP20.16■□□□□ 0.82
PPP1CA-210ENST00000542876 GPNMBQ14956 572 aa20.16■□□□□ 0.82
PPP1CA-210ENST00000542876 HSDL1Q3SXM5 330 aa20.16■□□□□ 0.82
PPP1CA-210ENST00000542876 GNPTABQ3T906 1256 aa20.16■□□□□ 0.82
PPP1CA-210ENST00000542876 CATIPQ7Z7H3 387 aa20.16■□□□□ 0.82
PPP1CA-210ENST00000542876 EPOPA6NHQ4 379 aa20.15■□□□□ 0.82
PPP1CA-210ENST00000542876 CHMLP26374 656 aa20.15■□□□□ 0.82
PPP1CA-210ENST00000542876 PDE4AP27815 886 aa20.15■□□□□ 0.82
PPP1CA-210ENST00000542876 IL31RAQ8NI17 732 aa20.15■□□□□ 0.82
PPP1CA-210ENST00000542876 COG5Q9UP83 839 aa20.15■□□□□ 0.82
PPP1CA-210ENST00000542876 EMSYQ7Z589 1322 aa20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 E7EWF7 191 aa20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 NOP56O00567 594 aaKnown RBP20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 ARHGEF15O94989 841 aa20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 DEFB103AP81534 67 aa20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 ZNF200P98182 395 aaPredicted RBP20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 SP2Q02086 613 aa20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 TFF2Q03403 129 aa20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 PTH1RQ03431 593 aa20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 TROAPQ12815 778 aa20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 GRB10Q13322 594 aa20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 ZNF618Q5T7W0 954 aa20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 RAD9AQ99638 391 aa20.14■□□□□ 0.81
PPP1CA-210ENST00000542876 C17orf102A2RUQ5 167 aa20.13■□□□□ 0.81
PPP1CA-210ENST00000542876 STAM2O75886 525 aa20.13■□□□□ 0.81
PPP1CA-210ENST00000542876 GJB5O95377 273 aa20.13■□□□□ 0.81
PPP1CA-210ENST00000542876 THPOP40225 353 aa20.13■□□□□ 0.81
PPP1CA-210ENST00000542876 TRIM71Q2Q1W2 868 aaKnown RBP20.13■□□□□ 0.81
PPP1CA-210ENST00000542876 KRT40Q6A162 431 aa20.13■□□□□ 0.81
PPP1CA-210ENST00000542876 TMCO2Q7Z6W1 182 aaPredicted RBP20.13■□□□□ 0.81
PPP1CA-210ENST00000542876 PIBF1Q8WXW3 757 aa20.13■□□□□ 0.81
PPP1CA-210ENST00000542876 ZFP91Q96JP5 570 aaPredicted RBP20.13■□□□□ 0.81
PPP1CA-210ENST00000542876 MYH6P13533 1939 aa20.13■□□□□ 0.81
PPP1CA-210ENST00000542876 KIAA1217Q5T5P2 1943 aa20.13■□□□□ 0.81
PPP1CA-210ENST00000542876 LCHNA4D1U4 455 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 RSPH10B2B2RC85 870 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 H3BRB1 525 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 CYTH3O43739 400 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 LGR5O75473 907 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 RSPH10BP0C881 870 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 BMP1P13497 986 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 NEDD9Q14511 834 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 SLC35G1Q2M3R5 365 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 SERINC5Q86VE9 423 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 CTCFLQ8NI51 663 aaPredicted RBP20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 CUL5Q93034 780 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 ATP6V0A1Q93050 837 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 HLA-CQ95604 372 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 C16orf70Q9BSU1 422 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 TUT1Q9H6E5 874 aaKnown RBP20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 SENP2Q9HC62 589 aa20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 SUPT16HQ9Y5B9 1047 aaKnown RBP20.12■□□□□ 0.81
PPP1CA-210ENST00000542876 PRRC2BQ5JSZ5 2229 aaKnown RBP20.11■□□□□ 0.81
PPP1CA-210ENST00000542876 TET1Q8NFU7 2136 aa20.11■□□□□ 0.81
PPP1CA-210ENST00000542876 KIF5BP33176 963 aa20.11■□□□□ 0.81
PPP1CA-210ENST00000542876 KCNQ1P51787 676 aa20.11■□□□□ 0.81
PPP1CA-210ENST00000542876 FAM117BQ6P1L5 589 aa20.11■□□□□ 0.81
PPP1CA-210ENST00000542876 GPKOWQ92917 476 aaPredicted RBP eCLIP20.11■□□□□ 0.81
PPP1CA-210ENST00000542876 WNT8BQ93098 351 aa20.11■□□□□ 0.81
PPP1CA-210ENST00000542876 RRP36Q96EU6 259 aaKnown RBP20.11■□□□□ 0.81
PPP1CA-210ENST00000542876 TGS1Q96RS0 853 aaKnown RBP20.11■□□□□ 0.81
PPP1CA-210ENST00000542876 USP26Q9BXU7 913 aa20.11■□□□□ 0.81
PPP1CA-210ENST00000542876 LMCD1Q9NZU5 365 aa20.11■□□□□ 0.81
PPP1CA-210ENST00000542876 NCOR1O75376 2440 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 SGSM2O43147 1006 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 FIBPO43427 364 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 AMHP03971 560 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 LGALS2P05162 132 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 SMIM10L2AP0DMW4 78 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 SMIM10L2BP0DMW5 78 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 GNAT1P11488 350 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 TRAF7Q6Q0C0 670 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 CASC1Q6TDU7 716 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 METTL7BQ6UX53 244 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 SMARCC2Q8TAQ2 1214 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 INPP4AQ96PE3 977 aaPredicted RBP20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 SEC63Q9UGP8 760 aaKnown RBP20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 MTUS1Q9ULD2 1270 aa20.1■□□□□ 0.81
PPP1CA-210ENST00000542876 XIRP2A4UGR9 3374 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms