RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 UBE2OQ9C0C9 1292 aaKnown RBP17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 NCOA5Q9HCD5 579 aaKnown RBP17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 PCDHA6Q9UN73 950 aa17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 PCDHA8Q9Y5H6 950 aa17.74■□□□□ 0.43
ECHDC2-223ENST00000542552 SMCO2A6NFE2 343 aa17.73■□□□□ 0.43
ECHDC2-223ENST00000542552 UBA1P22314 1058 aaKnown RBP17.73■□□□□ 0.43
ECHDC2-223ENST00000542552 CLK2P49760 499 aaKnown RBP17.73■□□□□ 0.43
ECHDC2-223ENST00000542552 FXR1P51114 621 aaKnown RBP eCLIP17.73■□□□□ 0.43
ECHDC2-223ENST00000542552 ADCY7P51828 1080 aa17.73■□□□□ 0.43
ECHDC2-223ENST00000542552 BADQ92934 168 aa17.73■□□□□ 0.43
ECHDC2-223ENST00000542552 PHKBQ93100 1093 aa17.73■□□□□ 0.43
ECHDC2-223ENST00000542552 RNF26Q9BY78 433 aaPredicted RBP17.73■□□□□ 0.43
ECHDC2-223ENST00000542552 GLT8D2Q9H1C3 349 aa17.73■□□□□ 0.43
ECHDC2-223ENST00000542552 RTEL1Q9NZ71 1219 aa17.73■□□□□ 0.43
ECHDC2-223ENST00000542552 ESYT2A0FGR8 921 aa17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 SPDYE3A6NKU9 549 aa17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 TLR3O15455 904 aaKnown RBP17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 FIBPO43427 364 aa17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 GGPS1O95749 300 aa17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 TIMP1P01033 207 aa17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 FOSP01100 380 aaPredicted RBP17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 DGKDQ16760 1214 aa17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 NBPF20Q3BBV1 942 aa17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 KAT2BQ92831 832 aa17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 LARP6Q9BRS8 491 aaKnown RBP17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 TRPV6Q9H1D0 765 aa17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 BCAS3Q9H6U6 928 aa17.72■□□□□ 0.43
ECHDC2-223ENST00000542552 PPFIA4O75335 1185 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 RAG1P15918 1043 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 ITGB5P18084 799 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 HSDL1Q3SXM5 330 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 C8orf34Q49A92 452 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 NFRKBQ6P4R8 1299 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 TDHQ8IZJ6 230 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 SENP7Q9BQF6 1050 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 SLC26A6Q9BXS9 759 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 ZMYND12Q9H0C1 365 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 UBIAD1Q9Y5Z9 338 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 DOCK5Q9H7D0 1870 aa17.71■□□□□ 0.43
ECHDC2-223ENST00000542552 ADAMTS3O15072 1205 aa17.7■□□□□ 0.42
ECHDC2-223ENST00000542552 B4GALT4O60513 344 aa17.7■□□□□ 0.42
ECHDC2-223ENST00000542552 PTPN11Q06124 597 aaPredicted RBP17.7■□□□□ 0.42
ECHDC2-223ENST00000542552 AP3B2Q13367 1082 aa17.7■□□□□ 0.42
ECHDC2-223ENST00000542552 NLRX1Q86UT6 975 aa17.7■□□□□ 0.42
ECHDC2-223ENST00000542552 GPRASP2Q96D09 838 aa17.7■□□□□ 0.42
ECHDC2-223ENST00000542552 SPATA33Q96N06 139 aa17.7■□□□□ 0.42
ECHDC2-223ENST00000542552 EHMT1Q9H9B1 1298 aa17.7■□□□□ 0.42
ECHDC2-223ENST00000542552 TPCN1Q9ULQ1 816 aa17.7■□□□□ 0.42
ECHDC2-223ENST00000542552 F2P00734 622 aa17.69■□□□□ 0.42
ECHDC2-223ENST00000542552 AKAP17AQ02040 695 aaKnown RBP17.69■□□□□ 0.42
ECHDC2-223ENST00000542552 NEDD9Q14511 834 aa17.69■□□□□ 0.42
ECHDC2-223ENST00000542552 MFSD5Q6N075 450 aa17.69■□□□□ 0.42
ECHDC2-223ENST00000542552 METTL7BQ6UX53 244 aa17.69■□□□□ 0.42
ECHDC2-223ENST00000542552 SESTD1Q86VW0 696 aa17.69■□□□□ 0.42
ECHDC2-223ENST00000542552 CCDC12Q8WUD4 166 aaPredicted RBP17.69■□□□□ 0.42
ECHDC2-223ENST00000542552 CDHR1Q96JP9 859 aa17.69■□□□□ 0.42
ECHDC2-223ENST00000542552 MLXIPQ9HAP2 919 aa17.69■□□□□ 0.42
ECHDC2-223ENST00000542552 JADE2Q9NQC1 790 aa17.69■□□□□ 0.42
ECHDC2-223ENST00000542552 TMEM260Q9NX78 707 aa17.69■□□□□ 0.42
ECHDC2-223ENST00000542552 HAS3O00219 553 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 PFKFB2O60825 505 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 PPFIA3O75145 1194 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 KCNA2P16389 499 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 SREBF1P36956 1147 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 AK2P54819 239 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 STK3Q13188 491 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 ANKRD1Q15327 319 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 LRIT3Q3SXY7 679 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 CRYGNQ8WXF5 182 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 ANO3Q9BYT9 981 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 C6orf50Q9HD87 102 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 SH3GLB2Q9NR46 395 aa17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 TRMT13Q9NUP7 481 aaKnown RBP17.68■□□□□ 0.42
ECHDC2-223ENST00000542552 MAFGO15525 162 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 SORBS3O60504 671 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 ATP9AO75110 1047 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 SUPT20HL2P0C7V6 817 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 EPHB4P54760 987 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 FPGSQ05932 587 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 SSRP1Q08945 709 aaKnown RBP17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 SCRN1Q12765 414 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 MCTP2Q6DN12 878 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 CYFIP1Q7L576 1253 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 TRIM22Q8IYM9 498 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 GIMAP8Q8ND71 665 aaPredicted RBP17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 PPP1R13LQ8WUF5 828 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 PGBD1Q96JS3 809 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 MXRA8Q9BRK3 442 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 C16orf70Q9BSU1 422 aa17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 NOC4LQ9BVI4 516 aaKnown RBP17.67■□□□□ 0.42
ECHDC2-223ENST00000542552 SOX1O00570 391 aaPredicted RBP17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 CPLX1O14810 134 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 DEXIO95424 95 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 ZNF286BP0CG31 522 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 GNA11P29992 359 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 PSEN2P49810 448 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 MTMR1Q13613 665 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 SHHQ15465 462 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 JAKMIP3Q5VZ66 844 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 CPLX2Q6PUV4 134 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms