RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 NAP1L4Q99733 375 aaKnown RBP19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 RGL1Q9NZL6 768 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 SBF1O95248 1867 aa19.3■□□□□ 0.68
TMEM50B-210ENST00000542230 LPAR1Q92633 364 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 C16orf45Q96MC5 204 aaPredicted RBP19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 SRRTQ9BXP5 876 aaKnown RBP19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 BCAS3Q9H6U6 928 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 KCNJ18B7U540 433 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 ARP10275 920 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 BACE1P56817 501 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 KCNJ12Q14500 433 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 TCP11X2Q5H9J9 407 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 HYIQ5T013 277 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 SPECC1LQ69YQ0 1117 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 ATG4CQ96DT6 458 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 SYT17Q9BSW7 474 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 SLC38A10Q9HBR0 1119 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 TBC1D7Q9P0N9 293 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 RNF181Q9P0P0 153 aa19.29■□□□□ 0.68
TMEM50B-210ENST00000542230 ABCB11O95342 1321 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 CHMP2AO43633 222 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 PLA2G4BP0C869 781 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 APOBEC3FQ8IUX4 373 aaKnown RBP19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 KLRG1Q96E93 195 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 SEMA6BQ9H3T3 888 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 RIPK3Q9Y572 518 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 DCAF15Q66K64 600 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 UNC13DQ70J99 1090 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 CCDC150Q8NCX0 1101 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 CPLX3Q8WVH0 158 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 TRIM47Q96LD4 638 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 PPP1R9AQ9ULJ8 1098 aa19.28■□□□□ 0.68
TMEM50B-210ENST00000542230 PSMA7O14818 248 aa19.27■□□□□ 0.68
TMEM50B-210ENST00000542230 ZBTB39O15060 712 aa19.27■□□□□ 0.68
TMEM50B-210ENST00000542230 ARSHQ5FYA8 562 aa19.27■□□□□ 0.68
TMEM50B-210ENST00000542230 E4F1Q66K89 784 aaPredicted RBP19.27■□□□□ 0.68
TMEM50B-210ENST00000542230 ZNF280CQ8ND82 737 aa19.27■□□□□ 0.68
TMEM50B-210ENST00000542230 PICK1Q9NRD5 415 aa19.27■□□□□ 0.68
TMEM50B-210ENST00000542230 PKD2L1Q9P0L9 805 aa19.27■□□□□ 0.68
TMEM50B-210ENST00000542230 PBX1P40424 430 aa19.27■□□□□ 0.67
TMEM50B-210ENST00000542230 PABPC4Q13310 644 aaKnown RBP eCLIP19.27■□□□□ 0.67
TMEM50B-210ENST00000542230 MCTP2Q6DN12 878 aa19.27■□□□□ 0.67
TMEM50B-210ENST00000542230 TC2NQ8N9U0 490 aa19.27■□□□□ 0.67
TMEM50B-210ENST00000542230 CNKSR2Q8WXI2 1034 aa19.27■□□□□ 0.67
TMEM50B-210ENST00000542230 LIMA1Q9UHB6 759 aaKnown RBP19.27■□□□□ 0.67
TMEM50B-210ENST00000542230 ADM5C9JUS6 153 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 RNF225M0QZC1 329 aaPredicted RBP19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 TBX3O15119 743 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 PEX10O60683 326 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 HSD17B4P51659 736 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 COPB1P53618 953 aaKnown RBP19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 TMEM139Q8IV31 216 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 P2RX5Q93086 422 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 FAM20AQ96MK3 541 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 LRRC10BA6NIK2 292 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 N4BP3O15049 544 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 ITGB5P18084 799 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 EHHADHQ08426 723 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 CEP55Q53EZ4 464 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 GPBP1Q86WP2 473 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 PCNTO95613 3336 aa19.26■□□□□ 0.67
TMEM50B-210ENST00000542230 DICER1Q9UPY3 1922 aaKnown RBP19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 DOCK1Q14185 1865 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 CYP11B2P19099 503 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 ERCC3P19447 782 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 SLC12A3P55017 1021 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 RBL2Q08999 1139 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 CTTNQ14247 550 aaKnown RBP19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 OTOP1Q7RTM1 612 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 CSGALNACT2Q8N6G5 542 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 TMX1Q9H3N1 280 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 VWA5AO00534 786 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 PSMD10O75832 226 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 CCNE1P24864 410 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 COASYQ13057 564 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 STIM1Q13586 685 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 CNNM4Q6P4Q7 775 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 DHTKD1Q96HY7 919 aaPredicted RBP19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 EIF2AK1Q9BQI3 630 aaKnown RBP19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 NT5C3AQ9H0P0 336 aa19.25■□□□□ 0.67
TMEM50B-210ENST00000542230 KDM3AQ9Y4C1 1321 aa19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 PVALEFA0A1B0GWK0 134 aa19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 USP2O75604 605 aaPredicted RBP19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 RPA1P27694 616 aa19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 TRAF1Q13077 416 aa19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 LRCH2Q5VUJ6 765 aa19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 CCAR2Q8N163 923 aaKnown RBP19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 PIGOQ8TEQ8 1089 aa19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 TAAR1Q96RJ0 339 aa19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 WDR11Q9BZH6 1224 aa19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 DDX39AO00148 427 aaKnown RBP19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 RPS6P62753 249 aaKnown RBP19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 SYTL5Q8TDW5 730 aaPredicted RBP19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 CCDC47Q96A33 483 aaKnown RBP19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 PANK4Q9NVE7 773 aa19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 WRAP73Q9P2S5 460 aaPredicted RBP19.24■□□□□ 0.67
TMEM50B-210ENST00000542230 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.23■□□□□ 0.67
TMEM50B-210ENST00000542230 SLC5A5Q92911 643 aa19.23■□□□□ 0.67
TMEM50B-210ENST00000542230 EIF2AK2P19525 551 aaKnown RBP19.22■□□□□ 0.67
TMEM50B-210ENST00000542230 USP14P54578 494 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms