RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TRIM37O94972 964 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 EHHADHQ08426 723 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 PPFIA1Q13136 1202 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 HLTFQ14527 1009 aaKnown RBP eCLIP16.94■□□□□ 0.3
CNOT9-208ENST00000542068 RNF187Q5TA31 235 aaPredicted RBP16.94■□□□□ 0.3
CNOT9-208ENST00000542068 HAUS3Q68CZ6 603 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 TTBK2Q6IQ55 1244 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 MAATS1Q7Z4T9 603 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 DHX37Q8IY37 1157 aaKnown RBP16.94■□□□□ 0.3
CNOT9-208ENST00000542068 ZIM3Q96PE6 472 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 EFCC1Q9HA90 598 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 STIM2Q9P246 746 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 BCCIPQ9P287 314 aaKnown RBP eCLIP16.94■□□□□ 0.3
CNOT9-208ENST00000542068 PAPPAQ13219 1627 aa16.93■□□□□ 0.3
CNOT9-208ENST00000542068 MYMKA6NI61 221 aa16.93■□□□□ 0.3
CNOT9-208ENST00000542068 GLI1P08151 1106 aa16.93■□□□□ 0.3
CNOT9-208ENST00000542068 CCDC40Q4G0X9 1142 aa16.93■□□□□ 0.3
CNOT9-208ENST00000542068 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
CNOT9-208ENST00000542068 ANO9A1A5B4 782 aa16.93■□□□□ 0.3
CNOT9-208ENST00000542068 BACH1O14867 736 aa16.93■□□□□ 0.3
CNOT9-208ENST00000542068 KRT18P05783 430 aaKnown RBP16.93■□□□□ 0.3
CNOT9-208ENST00000542068 NNTQ13423 1086 aa16.93■□□□□ 0.3
CNOT9-208ENST00000542068 SV2BQ7L1I2 683 aa16.93■□□□□ 0.3
CNOT9-208ENST00000542068 MSL3Q8N5Y2 521 aaKnown RBP16.93■□□□□ 0.3
CNOT9-208ENST00000542068 TSGA10Q9BZW7 698 aa16.93■□□□□ 0.3
CNOT9-208ENST00000542068 LRRC4BQ9NT99 713 aa16.93■□□□□ 0.3
CNOT9-208ENST00000542068 HEXIM1O94992 359 aaKnown RBP16.92■□□□□ 0.3
CNOT9-208ENST00000542068 MNAT1P51948 309 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 CALCRLQ16602 461 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 CFAP58Q5T655 872 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 KIAA0825Q8IV33 1275 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 SNX29Q8TEQ0 813 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 NOC3LQ8WTT2 800 aaKnown RBP16.92■□□□□ 0.3
CNOT9-208ENST00000542068 KAT2BQ92831 832 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 NUDT12Q9BQG2 462 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 CCSER1Q9C0I3 900 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 POLLQ9UGP5 575 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 FLT1P17948 1338 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 CNTNAP4Q9C0A0 1308 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 TRAF5O00463 557 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 AKR1B1P15121 316 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 POLR2FP61218 127 aaKnown RBP16.92■□□□□ 0.3
CNOT9-208ENST00000542068 RAPGEF1Q13905 1077 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 CNNM4Q6P4Q7 775 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 EFCAB13Q8IY85 973 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 FNBP4Q8N3X1 1017 aaPredicted RBP16.92■□□□□ 0.3
CNOT9-208ENST00000542068 USP40Q9NVE5 1235 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 OPA1O60313 960 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 INPP5BP32019 993 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 SEC24CP53992 1094 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 CAPN7Q9Y6W3 813 aa16.92■□□□□ 0.3
CNOT9-208ENST00000542068 PALMO75781 387 aa16.91■□□□□ 0.3
CNOT9-208ENST00000542068 RETREG2Q8NC44 543 aa16.91■□□□□ 0.3
CNOT9-208ENST00000542068 RTFDC1Q9BY42 306 aaPredicted RBP16.91■□□□□ 0.3
CNOT9-208ENST00000542068 DBNDD1Q9H9R9 158 aa16.91■□□□□ 0.3
CNOT9-208ENST00000542068 PLAGL2Q9UPG8 496 aa16.91■□□□□ 0.3
CNOT9-208ENST00000542068 CICQ96RK0 1608 aaPredicted RBP16.91■□□□□ 0.3
CNOT9-208ENST00000542068 A0A087WUV0 522 aaPredicted RBP16.91■□□□□ 0.3
CNOT9-208ENST00000542068 EIF3HO15372 352 aaKnown RBP eCLIP16.91■□□□□ 0.3
CNOT9-208ENST00000542068 AMPD3Q01432 767 aa16.91■□□□□ 0.3
CNOT9-208ENST00000542068 NOX5Q96PH1 765 aa16.91■□□□□ 0.3
CNOT9-208ENST00000542068 TLR10Q9BXR5 811 aa16.91■□□□□ 0.3
CNOT9-208ENST00000542068 STRCQ7RTU9 1775 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 ATP2C2O75185 946 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 FGRP09769 529 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 KRT25Q7Z3Z0 450 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 TBC1D5Q92609 795 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 RBM17Q96I25 401 aaKnown RBP16.9■□□□□ 0.3
CNOT9-208ENST00000542068 LSM14BQ9BX40 385 aaKnown RBP16.9■□□□□ 0.3
CNOT9-208ENST00000542068 PACSIN1Q9BY11 444 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 BCL9LQ86UU0 1499 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 TCP1P17987 556 aaKnown RBP16.9■□□□□ 0.3
CNOT9-208ENST00000542068 TMEM266Q2M3C6 531 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 MMGT1Q8N4V1 131 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 OR2W6PQ8NHA6 318 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 MMTAG2Q9BU76 263 aaKnown RBP16.9■□□□□ 0.3
CNOT9-208ENST00000542068 TAL1P17542 331 aaPredicted RBP16.9■□□□□ 0.3
CNOT9-208ENST00000542068 EPHB4P54760 987 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 USH1GQ495M9 461 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 TMED8Q6PL24 325 aaPredicted RBP16.9■□□□□ 0.3
CNOT9-208ENST00000542068 KCNK18Q7Z418 384 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 ERGIC2Q96RQ1 377 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 ADAMTS1Q9UHI8 967 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 DUOX1Q9NRD9 1551 aa16.9■□□□□ 0.3
CNOT9-208ENST00000542068 RNPC3Q96LT9 517 aaKnown RBP16.89■□□□□ 0.29
CNOT9-208ENST00000542068 PPANQ9NQ55 473 aaKnown RBP16.89■□□□□ 0.29
CNOT9-208ENST00000542068 SIK3Q9Y2K2 1263 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 ROBO1Q9Y6N7 1651 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 USP17L15C9J2P7 530 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 USP17L13C9JLJ4 530 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 USP17L11C9JVI0 530 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 USP17L18D6R9N7 530 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 USP17L22D6RA61 530 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 USP17L17D6RBQ6 530 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 USP17L19D6RCP7 530 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 GOLGA8KD6RF30 607 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 USP17L20D6RJB6 530 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 MYO1FO00160 1098 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 ADCY7P51828 1080 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 USP17L24Q0WX57 530 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms