RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
YBX3-212ENST00000542002 RBAK-RBAKDNI3L0D1 243 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 hCG_1984214I3L0E3 225 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 GH1P01241 217 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 TGFB3P10600 412 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 FDPSP14324 419 aaKnown RBP11.16□□□□□ -0.62
YBX3-212ENST00000542002 UBA1P22314 1058 aaKnown RBP11.16□□□□□ -0.62
YBX3-212ENST00000542002 MAGEA10P43363 369 aaPredicted RBP11.16□□□□□ -0.62
YBX3-212ENST00000542002 RBM25P49756 843 aaKnown RBP11.16□□□□□ -0.62
YBX3-212ENST00000542002 CPT1AP50416 773 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 SSRP1Q08945 709 aaKnown RBP11.16□□□□□ -0.62
YBX3-212ENST00000542002 ITGA7Q13683 1181 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 NPY5RQ15761 445 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 HSDL1Q3SXM5 330 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 JAKMIP3Q5VZ66 844 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
YBX3-212ENST00000542002 RASGRP4Q8TDF6 673 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 CRYGNQ8WXF5 182 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 TOX2Q96NM4 488 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 GDF15Q99988 308 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 TRPV6Q9H1D0 765 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 SLKQ9H2G2 1235 aaPredicted RBP11.16□□□□□ -0.62
YBX3-212ENST00000542002 PDLIM7Q9NR12 457 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 GJB4Q9NTQ9 266 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 UBIAD1Q9Y5Z9 338 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 PDE4DIPQ5VU43 2346 aa11.16□□□□□ -0.62
YBX3-212ENST00000542002 A0A0U1RQG5 324 aaPredicted RBP11.15□□□□□ -0.62
YBX3-212ENST00000542002 ESYT2A0FGR8 921 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 SPDYE3A6NKU9 549 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 ZEB2O60315 1214 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 EIF5BO60841 1220 aaKnown RBP11.15□□□□□ -0.62
YBX3-212ENST00000542002 STAM2O75886 525 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 CABYRO75952 493 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 GGPS1O95749 300 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 CD4P01730 458 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 MMP3P08254 477 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 MDM2Q00987 491 aaPredicted RBP11.15□□□□□ -0.62
YBX3-212ENST00000542002 AKAP17AQ02040 695 aaKnown RBP11.15□□□□□ -0.62
YBX3-212ENST00000542002 LAMC2Q13753 1193 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 ANKRD1Q15327 319 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 NBPF20Q3BBV1 942 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 XRRA1Q6P2D8 792 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 CYFIP1Q7L576 1253 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 FAM126BQ8IXS8 530 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 DHX37Q8IY37 1157 aaKnown RBP11.15□□□□□ -0.62
YBX3-212ENST00000542002 PPTC7Q8NI37 304 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 MTG1Q9BT17 334 aaPredicted RBP11.15□□□□□ -0.62
YBX3-212ENST00000542002 MYH6P13533 1939 aa11.15□□□□□ -0.62
YBX3-212ENST00000542002 CPLX1O14810 134 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 KIAA0355O15063 1070 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 FIBPO43427 364 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 B4GALT4O60513 344 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 CLTBP09497 229 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 ARP10275 920 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 HOXD8P13378 290 aaPredicted RBP11.14□□□□□ -0.63
YBX3-212ENST00000542002 KCNA2P16389 499 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 KCNV1Q6PIU1 500 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 GTF3C6Q969F1 213 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 SPATA33Q96N06 139 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 CTAGE1Q96RT6 745 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 MXRA8Q9BRK3 442 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 ANO3Q9BYT9 981 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 C6orf50Q9HD87 102 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 JADE2Q9NQC1 790 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 PRDM5Q9NQX1 630 aaPredicted RBP11.14□□□□□ -0.63
YBX3-212ENST00000542002 TRMT13Q9NUP7 481 aaKnown RBP11.14□□□□□ -0.63
YBX3-212ENST00000542002 TMEM39AQ9NV64 488 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 POLR3EQ9NVU0 708 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 TBX21Q9UL17 535 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 KCNJ14Q9UNX9 436 aa11.14□□□□□ -0.63
YBX3-212ENST00000542002 DCDC2CA8MYV0 355 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 FAM86B1E9PN63 330 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 M0R2N6 131 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 MEIS1O00470 390 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 JAK2O60674 1132 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 KPNA6O60684 536 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 PPFIA4O75335 1185 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 DEXIO95424 95 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 FOSP01100 380 aaPredicted RBP11.13□□□□□ -0.63
YBX3-212ENST00000542002 FAM86B2P0C5J1 330 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 ZNF286BP0CG31 522 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 SREBF1P36956 1147 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 EPHB4P54760 987 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 ARHGAP4P98171 946 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 HIC1Q14526 733 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 DGKDQ16760 1214 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 GNPTABQ3T906 1256 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 HABP4Q5JVS0 413 aaKnown RBP11.13□□□□□ -0.63
YBX3-212ENST00000542002 NLRX1Q86UT6 975 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 TEX2Q8IWB9 1127 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 TRIM22Q8IYM9 498 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 BADQ92934 168 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 GPRASP2Q96D09 838 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 UIMC1Q96RL1 719 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 GPR20Q99678 358 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 SENP7Q9BQF6 1050 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 C16orf70Q9BSU1 422 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 MLXIPQ9HAP2 919 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 SH3GLB2Q9NR46 395 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 KCNH7Q9NS40 1196 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms