RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 AK8Q96MA6 479 aa17.69■□□□□ 0.42
VARS2-212ENST00000542001 K7ENM7 598 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 BBOX1O75936 387 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 H2AFZP0C0S5 128 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 TUBB2AQ13885 445 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 FAM102BQ5T8I3 360 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 H2AFVQ71UI9 128 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 TUBB2BQ9BVA1 445 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 IFT172Q9UG01 1749 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 SALL1Q9NSC2 1324 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 GOLGA8IPA6NC78 632 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 GOLGA8JA6NMD2 632 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 PPP1R3GB7ZBB8 358 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 PKN1Q16512 942 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 ANO3Q9BYT9 981 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 OVOS2A0A0G2JMS6 1433 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 A0A1W2PRG0 241 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 E7EVH7 732 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 TCP1P17987 556 aaKnown RBP17.68■□□□□ 0.42
VARS2-212ENST00000542001 IRX5P78411 483 aaPredicted RBP17.68■□□□□ 0.42
VARS2-212ENST00000542001 ADGRF4Q8IZF3 695 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 MMS19Q96T76 1030 aa17.68■□□□□ 0.42
VARS2-212ENST00000542001 RASA1P20936 1047 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 ALDH1B1P30837 517 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 TUBB4BP68371 445 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 PAK2Q13177 524 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 SF3B3Q15393 1217 aaKnown RBP17.67■□□□□ 0.42
VARS2-212ENST00000542001 GPATCH4Q5T3I0 446 aaKnown RBP17.67■□□□□ 0.42
VARS2-212ENST00000542001 GBP6Q6ZN66 633 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 NFU1Q9UMS0 254 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 KNDC1Q76NI1 1749 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 ORC4O43929 436 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 MIER3Q7Z3K6 550 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 CCDC105Q8IYK2 499 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 FNBP1Q96RU3 617 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 THAP9Q9H5L6 903 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 GCOM1H8Y6P7 765 aaPredicted RBP17.67■□□□□ 0.42
VARS2-212ENST00000542001 N4BP1O75113 896 aaKnown RBP17.67■□□□□ 0.42
VARS2-212ENST00000542001 MYZAPP0CAP1 466 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 SEC23AQ15436 765 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 CERS3Q8IU89 383 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 RGL1Q9NZL6 768 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 ASIC3Q9UHC3 531 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 PTPN22Q9Y2R2 807 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 CTNNA1P35221 906 aaKnown RBP17.67■□□□□ 0.42
VARS2-212ENST00000542001 MESDQ14696 234 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 QRICH1Q2TAL8 776 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 FBXO33Q7Z6M2 555 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 CCDC26Q8TAB7 109 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 MS4A14Q96JA4 679 aa17.67■□□□□ 0.42
VARS2-212ENST00000542001 SFR1Q86XK3 245 aa17.66■□□□□ 0.42
VARS2-212ENST00000542001 FOXP2O15409 715 aa17.66■□□□□ 0.42
VARS2-212ENST00000542001 GRIK5Q16478 980 aa17.66■□□□□ 0.42
VARS2-212ENST00000542001 XKR9Q5GH70 373 aa17.66■□□□□ 0.42
VARS2-212ENST00000542001 MICALCLQ6ZW33 695 aa17.66■□□□□ 0.42
VARS2-212ENST00000542001 DNAJC17Q9NVM6 304 aaKnown RBP17.66■□□□□ 0.42
VARS2-212ENST00000542001 MORC2Q9Y6X9 1032 aaPredicted RBP17.66■□□□□ 0.42
VARS2-212ENST00000542001 PNMA6FA0A0J9YX94 578 aa17.66■□□□□ 0.42
VARS2-212ENST00000542001 TICAM2Q86XR7 235 aa17.66■□□□□ 0.42
VARS2-212ENST00000542001 KDM3AQ9Y4C1 1321 aa17.66■□□□□ 0.42
VARS2-212ENST00000542001 MYMKA6NI61 221 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 LAD1O00515 517 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 BMP3P12645 472 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 CALCOCO2Q13137 446 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 HOOK3Q86VS8 718 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 ADSSL1Q8N142 457 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 ZNF512BQ96KM6 892 aaPredicted RBP17.65■□□□□ 0.42
VARS2-212ENST00000542001 GCNT4Q9P109 453 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 C21orf2O43822 256 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 GBP2P32456 591 aaPredicted RBP17.65■□□□□ 0.42
VARS2-212ENST00000542001 PMS1P54277 932 aaKnown RBP17.65■□□□□ 0.42
VARS2-212ENST00000542001 TTC31Q49AM3 519 aaPredicted RBP17.65■□□□□ 0.42
VARS2-212ENST00000542001 PRR5LQ6MZQ0 368 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 VGLL2Q8N8G2 317 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 UTP11Q9Y3A2 253 aaKnown RBP17.65■□□□□ 0.42
VARS2-212ENST00000542001 PALMO75781 387 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 POLR2MP0CAP2 368 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 TNNI1P19237 187 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 ERVK-24P63145 666 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 AMFRQ9UKV5 643 aa17.65■□□□□ 0.42
VARS2-212ENST00000542001 ACTN1P12814 892 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 MAP3K9P80192 1104 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 COASYQ13057 564 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 FAM186BQ8IYM0 893 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 NEDD1Q8NHV4 660 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 CCPG1Q9ULG6 757 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 CCDC121Q6ZUS5 278 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 RASAL2Q9UJF2 1139 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 DAGLAQ9Y4D2 1042 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 IFNAR2P48551 515 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 SEL1L2Q5TEA6 688 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 UNC13DQ70J99 1090 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 CUEDC2Q9H467 287 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 FLT1P17948 1338 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
VARS2-212ENST00000542001 SLCO1A2P46721 670 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 FAM83BQ5T0W9 1011 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 SLC51AQ86UW1 340 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 STK17AQ9UEE5 414 aa17.63■□□□□ 0.41
VARS2-212ENST00000542001 EIF2AK2P19525 551 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms