RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 USO1O60763 962 aaKnown RBP15□□□□□ -0.01
PTPN1-202ENST00000541713 TOM1O60784 492 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 RNF40O75150 1001 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 GGCXP38435 758 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
PTPN1-202ENST00000541713 TRIM14Q14142 442 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 TRADDQ15628 312 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 GJB7Q6PEY0 223 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 SEPT12Q8IYM1 358 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 FNBP4Q8N3X1 1017 aaPredicted RBP15□□□□□ -0.01
PTPN1-202ENST00000541713 SH3GLB2Q9NR46 395 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 RSPH10B2B2RC85 870 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 RSPH10BP0C881 870 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 ATP1A2P50993 1020 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 KCNA1Q09470 495 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 FAM26FQ5R3K3 315 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 ELMO3Q96BJ8 720 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 RGL1Q9NZL6 768 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 ITIH6Q6UXX5 1313 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 TACC1O75410 805 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 BARGINQ6ZT62 677 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 MYOCDQ8IZQ8 938 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 DNAJC7Q99615 494 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 TSG101Q99816 390 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
PTPN1-202ENST00000541713 CNTNAP4Q9C0A0 1308 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 CLRN2A0PK11 232 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 CLSTN1O94985 981 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 EEF2P13639 858 aaKnown RBP14.99□□□□□ -0.01
PTPN1-202ENST00000541713 COASYQ13057 564 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 QRICH1Q2TAL8 776 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 NAA35Q5VZE5 725 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 CCDC174Q6PII3 467 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 FAM114A1Q8IWE2 563 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 CHORDC1Q9UHD1 332 aaPredicted RBP14.99□□□□□ -0.01
PTPN1-202ENST00000541713 MYH10P35580 1976 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 CASP5P51878 434 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 AMPD2Q01433 879 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 KCNB1Q14721 858 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 TRAPPC11Q7Z392 1133 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 MTMR8Q96EF0 704 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 SPZ1Q9BXG8 430 aa14.99□□□□□ -0.01
PTPN1-202ENST00000541713 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.99□□□□□ -0.01
PTPN1-202ENST00000541713 CFBP00751 764 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 ADAM9Q13443 819 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 RAD54LQ92698 747 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 RAB34Q9BZG1 259 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 CALCOCO1Q9P1Z2 691 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 DDTLA6NHG4 134 aaPredicted RBP14.98□□□□□ -0.01
PTPN1-202ENST00000541713 PPEF1O14829 653 aaPredicted RBP14.98□□□□□ -0.01
PTPN1-202ENST00000541713 TTLL1O95922 423 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 ATP2B4P23634 1241 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 CDC42EP5Q6NZY7 148 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 CUL5Q93034 780 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 SPAG5Q96R06 1193 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 TRIM31Q9BZY9 425 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 TMX4Q9H1E5 349 aaPredicted RBP14.98□□□□□ -0.01
PTPN1-202ENST00000541713 USP14P54578 494 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 PRPF4BQ13523 1007 aaKnown RBP14.98□□□□□ -0.01
PTPN1-202ENST00000541713 HAS1Q92839 578 aa14.98□□□□□ -0.01
PTPN1-202ENST00000541713 TDRD3Q9H7E2 651 aaKnown RBP14.98□□□□□ -0.01
PTPN1-202ENST00000541713 EDIL3O43854 480 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 PLA2G4BP0C869 781 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 SLC9A1P19634 815 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 PPP4CP60510 307 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 CTTNQ14247 550 aaKnown RBP14.97□□□□□ -0.01
PTPN1-202ENST00000541713 KIAA0753Q2KHM9 967 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 SH2D3CQ8N5H7 860 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 C7orf25Q9BPX7 421 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 ZEB2O60315 1214 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 SORBS3O60504 671 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 MRPL12P52815 198 aaKnown RBP14.97□□□□□ -0.01
PTPN1-202ENST00000541713 SLFN13Q68D06 897 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 UNC13DQ70J99 1090 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 SELENOOQ9BVL4 669 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 MED24O75448 989 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 VAV2P52735 878 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 HLTFQ14527 1009 aaKnown RBP eCLIP14.97□□□□□ -0.01
PTPN1-202ENST00000541713 TPH2Q8IWU9 490 aa14.97□□□□□ -0.01
PTPN1-202ENST00000541713 TCP10L2B9ZVM9 353 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 PALMO75781 387 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 HLA-DOAP06340 250 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 PLCG2P16885 1265 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 NR2F2P24468 414 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 IRX5P78411 483 aaPredicted RBP14.96□□□□□ -0.01
PTPN1-202ENST00000541713 ZNF543Q08ER8 600 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 AP1M1Q9BXS5 423 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 BCCIPQ9P287 314 aaKnown RBP eCLIP14.96□□□□□ -0.01
PTPN1-202ENST00000541713 ABCB4P21439 1286 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 KLHL30Q0D2K2 578 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 MAN2A1Q16706 1144 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 FAM83BQ5T0W9 1011 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 AK8Q96MA6 479 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 BHMT2Q9H2M3 363 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 RBM12Q9NTZ6 932 aaKnown RBP14.96□□□□□ -0.01
PTPN1-202ENST00000541713 ROBO1Q9Y6N7 1651 aa14.96□□□□□ -0.01
PTPN1-202ENST00000541713 GUCY2DQ02846 1103 aa14.96□□□□□ -0.02
PTPN1-202ENST00000541713 CDC37Q16543 378 aaPredicted RBP14.96□□□□□ -0.02
PTPN1-202ENST00000541713 CERKLQ49MI3 558 aaPredicted RBP14.96□□□□□ -0.02
PTPN1-202ENST00000541713 MIGA2Q7L4E1 593 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms