RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TRIM13O60858 407 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 SASH1O94885 1247 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 FGFR1P11362 822 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 MILR1Q7Z6M3 343 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 FILIP1Q7Z7B0 1213 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 NLRP10Q86W26 655 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 FNIP1Q8TF40 1166 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 APPBP2Q92624 585 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 ZNF669Q96BR6 464 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-217ENST00000541578 CLDND1Q9NY35 253 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 RAPGEFL1Q9UHV5 662 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 PALD1Q9ULE6 856 aa5.87□□□□□ -1.47
SNHG1-217ENST00000541578 ENPP3O14638 875 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 PDPK1O15530 556 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 DNAJC6O75061 913 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 PABPC1P11940 636 aaKnown RBP5.86□□□□□ -1.47
SNHG1-217ENST00000541578 MTERF2Q49AM1 385 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 NSMFQ6X4W1 530 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 USP53Q70EK8 1073 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 HOMER1Q86YM7 354 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 SMARCC2Q8TAQ2 1214 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 KCNC2Q96PR1 638 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 CCDC113Q9H0I3 377 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 SPC25Q9HBM1 224 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 ARHGEF4Q9NR80 690 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 GPR27Q9NS67 375 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 FBXL7Q9UJT9 491 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 MSRB2Q9Y3D2 182 aa5.86□□□□□ -1.47
SNHG1-217ENST00000541578 EIF4G1Q04637 1599 aaKnown RBP5.85□□□□□ -1.47
SNHG1-217ENST00000541578 TRAV20A0A0B4J274 112 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 FFAR3O14843 346 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 HGSO14964 777 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-217ENST00000541578 DGKIO75912 1065 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 PLA2G1BP04054 148 aaKnown RBP5.85□□□□□ -1.47
SNHG1-217ENST00000541578 HOXA5P20719 270 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 HTRA3P83110 453 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 RASA3Q14644 834 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 CHRNA2Q15822 529 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 RSPO2Q6UXX9 243 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-217ENST00000541578 ETV3LQ6ZN32 361 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 TP53I13Q8NBR0 393 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-217ENST00000541578 SH3TC2Q8TF17 1288 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 DCAF4Q8WV16 495 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 OSBP2Q969R2 916 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 RNPC3Q96LT9 517 aaKnown RBP5.85□□□□□ -1.47
SNHG1-217ENST00000541578 DNAJC7Q99615 494 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 PHF20Q9BVI0 1012 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 SPATA9Q9BWV2 254 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 TMX1Q9H3N1 280 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 PCDH18Q9HCL0 1135 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 FANCLQ9NW38 375 aa5.85□□□□□ -1.47
SNHG1-217ENST00000541578 NOP58Q9Y2X3 529 aaKnown RBP5.85□□□□□ -1.47
SNHG1-217ENST00000541578 CUX2O14529 1486 aa5.84□□□□□ -1.47
SNHG1-217ENST00000541578 FAM221BA6H8Z2 402 aa5.84□□□□□ -1.47
SNHG1-217ENST00000541578 CYP2C8P10632 490 aa5.84□□□□□ -1.47
SNHG1-217ENST00000541578 RASGRF1Q13972 1273 aa5.84□□□□□ -1.47
SNHG1-217ENST00000541578 LILRA6Q6PI73 481 aa5.84□□□□□ -1.47
SNHG1-217ENST00000541578 SAPCD2Q86UD0 394 aa5.84□□□□□ -1.47
SNHG1-217ENST00000541578 SP8Q8IXZ3 490 aa5.84□□□□□ -1.47
SNHG1-217ENST00000541578 EPB41L1Q9H4G0 881 aa5.84□□□□□ -1.47
SNHG1-217ENST00000541578 PRKAB1Q9Y478 270 aa5.84□□□□□ -1.47
SNHG1-217ENST00000541578 C8BP07358 591 aa5.83□□□□□ -1.48
SNHG1-217ENST00000541578 VWA3BQ502W6 1294 aa5.83□□□□□ -1.48
SNHG1-217ENST00000541578 STEAP3Q658P3 488 aa5.83□□□□□ -1.48
SNHG1-217ENST00000541578 CD300LDQ6UXZ3 194 aa5.83□□□□□ -1.48
SNHG1-217ENST00000541578 SPATC1Q76KD6 591 aa5.83□□□□□ -1.48
SNHG1-217ENST00000541578 ZC3H18Q86VM9 953 aaKnown RBP5.83□□□□□ -1.48
SNHG1-217ENST00000541578 MIB1Q86YT6 1006 aa5.83□□□□□ -1.48
SNHG1-217ENST00000541578 ZNF526Q8TF50 670 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-217ENST00000541578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.83□□□□□ -1.48
SNHG1-217ENST00000541578 DDX11Q96FC9 970 aa5.83□□□□□ -1.48
SNHG1-217ENST00000541578 NOX5Q96PH1 765 aa5.83□□□□□ -1.48
SNHG1-217ENST00000541578 YIPF4Q9BSR8 244 aa5.83□□□□□ -1.48
SNHG1-217ENST00000541578 NGRNQ9NPE2 291 aaKnown RBP5.83□□□□□ -1.48
SNHG1-217ENST00000541578 LUC7LQ9NQ29 371 aaKnown RBP5.83□□□□□ -1.48
SNHG1-217ENST00000541578 MSCO60682 206 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 TADA3O75528 432 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 SLURP1P55000 103 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 CTSWP56202 376 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 SSRP1Q08945 709 aaKnown RBP5.82□□□□□ -1.48
SNHG1-217ENST00000541578 NTRK3Q16288 839 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 YOD1Q5VVQ6 348 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-217ENST00000541578 KCNT2Q6UVM3 1135 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 LIPIQ6XZB0 460 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 SCUBE1Q8IWY4 988 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 FAM126BQ8IXS8 530 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 ADGRG2Q8IZP9 1017 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 FAM26EQ8N5C1 309 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 LINC00482Q8N8I6 264 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 SYT8Q8NBV8 401 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 ZBTB8AQ96BR9 441 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 ZFYVE21Q9BQ24 234 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 JAM3Q9BX67 310 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 CDIP1Q9H305 208 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 IFT57Q9NWB7 429 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 PFDN2Q9UHV9 154 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 ZNF652Q9Y2D9 606 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 PCDHB4Q9Y5E5 795 aa5.82□□□□□ -1.48
SNHG1-217ENST00000541578 COL4A3BPQ9Y5P4 624 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms