RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 ZNF287Q9HBT7 754 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 PCDHA13Q9Y5I0 950 aa16.65■□□□□ 0.26
VARS2-211ENST00000541562 GPR75-ASB3A0A0A6YYF3 556 aa16.64■□□□□ 0.26
VARS2-211ENST00000541562 PPEF1O14829 653 aaPredicted RBP16.64■□□□□ 0.26
VARS2-211ENST00000541562 IBSPP21815 317 aaPredicted RBP16.64■□□□□ 0.26
VARS2-211ENST00000541562 AMPD3Q01432 767 aa16.64■□□□□ 0.26
VARS2-211ENST00000541562 CTTNQ14247 550 aaKnown RBP16.64■□□□□ 0.26
VARS2-211ENST00000541562 QRICH1Q2TAL8 776 aa16.64■□□□□ 0.26
VARS2-211ENST00000541562 VWA3BQ502W6 1294 aa16.64■□□□□ 0.26
VARS2-211ENST00000541562 CNNM4Q6P4Q7 775 aa16.64■□□□□ 0.26
VARS2-211ENST00000541562 HOMER2Q9NSB8 354 aa16.64■□□□□ 0.26
VARS2-211ENST00000541562 CCSER1Q9C0I3 900 aa16.64■□□□□ 0.25
VARS2-211ENST00000541562 CYP2C19P33261 490 aa16.64■□□□□ 0.25
VARS2-211ENST00000541562 COASYQ13057 564 aa16.64■□□□□ 0.25
VARS2-211ENST00000541562 FAM84AQ96KN4 292 aa16.64■□□□□ 0.25
VARS2-211ENST00000541562 MTA3Q9BTC8 594 aa16.64■□□□□ 0.25
VARS2-211ENST00000541562 PPP1R1BQ9UD71 204 aaPredicted RBP16.64■□□□□ 0.25
VARS2-211ENST00000541562 CCDC151A5D8V7 595 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 SLC9A1P19634 815 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 GGCXP38435 758 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 DGKZQ13574 1117 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 BARGINQ6ZT62 677 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 CDAN1Q8IWY9 1227 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 CEP350Q5VT06 3117 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 PDS5AQ29RF7 1337 aaKnown RBP16.63■□□□□ 0.25
VARS2-211ENST00000541562 LRRC10BA6NIK2 292 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 EEF1GP26641 437 aaKnown RBP16.63■□□□□ 0.25
VARS2-211ENST00000541562 FAM26FQ5R3K3 315 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 SH2D3CQ8N5H7 860 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 HAS1Q92839 578 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 MTMR8Q96EF0 704 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 DDX60Q8IY21 1712 aaKnown RBP16.63■□□□□ 0.25
VARS2-211ENST00000541562 CNTNAP4Q9C0A0 1308 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 RBM26Q5T8P6 1007 aaKnown RBP16.63■□□□□ 0.25
VARS2-211ENST00000541562 TPH2Q8IWU9 490 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 P2RX7Q99572 595 aaKnown RBP16.63■□□□□ 0.25
VARS2-211ENST00000541562 THAP9Q9H5L6 903 aa16.63■□□□□ 0.25
VARS2-211ENST00000541562 BICDL2A1A5D9 508 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 MED24O75448 989 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 POLD1P28340 1107 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 KRT83P78385 493 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 SP4Q02446 784 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 PRPF4BQ13523 1007 aaKnown RBP16.62■□□□□ 0.25
VARS2-211ENST00000541562 HAUS4Q9H6D7 363 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 VEZTQ9HBM0 779 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 BACH1O14867 736 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 RNF40O75150 1001 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 TTLL1O95922 423 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 PCP11498 1178 aaKnown RBP16.62■□□□□ 0.25
VARS2-211ENST00000541562 COPB2P35606 906 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 ECE1P42892 770 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 ZBED6P86452 979 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 ADAM9Q13443 819 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 SLFN13Q68D06 897 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 MYOCDQ8IZQ8 938 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 L1RE1Q9UN81 338 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 MMP10P09238 476 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 ABCB4P21439 1286 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 CASP4P49662 377 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 JAG1P78504 1218 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 ZC2HC1CQ53FD0 456 aaPredicted RBP16.62■□□□□ 0.25
VARS2-211ENST00000541562 RAD54LQ92698 747 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 AP1M1Q9BXS5 423 aa16.62■□□□□ 0.25
VARS2-211ENST00000541562 NID2Q14112 1375 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 PLA2G4BP0C869 781 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 CUL5Q93034 780 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 DHTKD1Q96HY7 919 aaPredicted RBP16.61■□□□□ 0.25
VARS2-211ENST00000541562 BHMT2Q9H2M3 363 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.61■□□□□ 0.25
VARS2-211ENST00000541562 CCDC66A2RUB6 948 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 ATP2B4P23634 1241 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 USP8P40818 1118 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 GPS2Q13227 327 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 CDC37Q16543 378 aaPredicted RBP16.61■□□□□ 0.25
VARS2-211ENST00000541562 TMX4Q9H1E5 349 aaPredicted RBP16.61■□□□□ 0.25
VARS2-211ENST00000541562 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
VARS2-211ENST00000541562 ZEB2O60315 1214 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 GH2P01242 217 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 MYBP10242 640 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 SHMT1P34896 483 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 CERKLQ49MI3 558 aaPredicted RBP16.61■□□□□ 0.25
VARS2-211ENST00000541562 DDX42Q86XP3 938 aaKnown RBP eCLIP16.61■□□□□ 0.25
VARS2-211ENST00000541562 SPAG5Q96R06 1193 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 SPZ1Q9BXG8 430 aa16.61■□□□□ 0.25
VARS2-211ENST00000541562 BCCIPQ9P287 314 aaKnown RBP eCLIP16.61■□□□□ 0.25
VARS2-211ENST00000541562 USO1O60763 962 aaKnown RBP16.6■□□□□ 0.25
VARS2-211ENST00000541562 LRRN2O75325 713 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 RAD17O75943 681 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 GCNT3O95395 438 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 KIAA0753Q2KHM9 967 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 ELOA2Q8IYF1 753 aaPredicted RBP16.6■□□□□ 0.25
VARS2-211ENST00000541562 GOLGA6L1Q8N7Z2 621 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 CCDC51Q96ER9 411 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 AFF2P51816 1311 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 NR2F2P24468 414 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 AMPD2Q01433 879 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 ZNF543Q08ER8 600 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 PHLDB2Q86SQ0 1253 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 DNAJC7Q99615 494 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 TSG101Q99816 390 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms