RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 PRKG1Q13976 671 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 SLMAPQ14BN4 828 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 EXOC8Q8IYI6 725 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 APOL6Q9BWW8 343 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 NOP53Q9NZM5 478 aaKnown RBP16.56■□□□□ 0.24
HMGA2-210ENST00000541363 ABCC5O15440 1437 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 WDR47O94967 919 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 DDX5P17844 614 aaKnown RBP16.56■□□□□ 0.24
HMGA2-210ENST00000541363 PLEKHM2Q8IWE5 1019 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 RBM46Q8TBY0 533 aaKnown RBP16.56■□□□□ 0.24
HMGA2-210ENST00000541363 CCDC78A2IDD5 438 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 ITGA6P23229 1130 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 CADPS2Q86UW7 1296 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 CCDC127Q96BQ5 260 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 PAGR1Q9BTK6 254 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 DCTPP1Q9H773 170 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 EPB41L5Q9HCM4 733 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 EIF3DO15371 548 aaKnown RBP eCLIP16.56■□□□□ 0.24
HMGA2-210ENST00000541363 PSTPIP2Q9H939 334 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 SORBS3O60504 671 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 NBPF10Q6P3W6 841 aaKnown RBP16.55■□□□□ 0.24
HMGA2-210ENST00000541363 NT5C1BQ96P26 610 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 MRPL47Q9HD33 250 aaKnown RBP16.55■□□□□ 0.24
HMGA2-210ENST00000541363 CAB39Q9Y376 341 aaPredicted RBP16.55■□□□□ 0.24
HMGA2-210ENST00000541363 PLCH2O75038 1416 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 ARHGAP10A1A4S6 786 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 GYG2O15488 501 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 ATP5HO75947 161 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 CIITAP33076 1130 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 BZW1Q7L1Q6 419 aaKnown RBP16.55■□□□□ 0.24
HMGA2-210ENST00000541363 ICA1LQ8NDH6 482 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 TTLL11Q8NHH1 800 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 A0A087WUV0 522 aaPredicted RBP16.55■□□□□ 0.24
HMGA2-210ENST00000541363 H0Y626 953 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 TRIM16O95361 564 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 ABCD1P33897 745 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 PAPOLAP51003 745 aaKnown RBP16.55■□□□□ 0.24
HMGA2-210ENST00000541363 CEP78Q5JTW2 689 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 OTULINQ96BN8 352 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 ZFYVE1Q9HBF4 777 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 PCDHB15Q9Y5E8 787 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 EPN1Q9Y6I3 576 aaPredicted RBP16.55■□□□□ 0.24
HMGA2-210ENST00000541363 AP2B1P63010 937 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 KIAA1841Q6NSI8 718 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 ARL13BQ3SXY8 428 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 DPP8Q6V1X1 898 aaPredicted RBP16.55■□□□□ 0.24
HMGA2-210ENST00000541363 SYT2Q8N9I0 419 aaPredicted RBP16.55■□□□□ 0.24
HMGA2-210ENST00000541363 RABGGTAQ92696 567 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 SELENONQ9NZV5 590 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 DYNLT1P63172 113 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 KRT40Q6A162 431 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 CATSPER3Q86XQ3 398 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 LRRC8AQ8IWT6 810 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 RNF139Q8WU17 664 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 ZNF653Q96CK0 615 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 PBKQ96KB5 322 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 SLC7A5P2Q9GIP4 190 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 AKT3Q9Y243 479 aa16.55■□□□□ 0.24
HMGA2-210ENST00000541363 NCOA1Q15788 1441 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 H0YIN7 160 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 GOLGA8RI6L899 631 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 RPN1P04843 607 aaKnown RBP16.54■□□□□ 0.24
HMGA2-210ENST00000541363 WASHC5Q12768 1159 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 AARS2Q5JTZ9 985 aaKnown RBP16.54■□□□□ 0.24
HMGA2-210ENST00000541363 RRM2BQ7LG56 351 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 SCAF11Q99590 1463 aaKnown RBP16.54■□□□□ 0.24
HMGA2-210ENST00000541363 MOCS3O95396 460 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 HNRNPCP07910 306 aaKnown RBP eCLIP16.54■□□□□ 0.241e-7■■■■□ 24.3
HMGA2-210ENST00000541363 HADHAP40939 763 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 CEP55Q53EZ4 464 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 C8orf37Q96NL8 207 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 SMYD3Q9H7B4 428 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 VCAM1P19320 739 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 MORF4L2Q15014 288 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 LARGE2Q8N3Y3 721 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 SOS2Q07890 1332 aaPredicted RBP16.54■□□□□ 0.24
HMGA2-210ENST00000541363 SCG2P13521 617 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 IL2RBP14784 551 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 CPA1P15085 419 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 TRAPPC10P48553 1259 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 SAAL1Q96ER3 474 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 TMEM60Q9H2L4 133 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 KIAA1468Q9P260 1216 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 PLTPP55058 493 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 DEPDC1Q5TB30 811 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 RINLQ6ZS11 566 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 VPS39Q96JC1 886 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 RGS9BPQ6ZS82 235 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 XAGE2Q96GT9 111 aa16.54■□□□□ 0.24
HMGA2-210ENST00000541363 APOBEC2Q9Y235 224 aaKnown RBP16.54■□□□□ 0.24
HMGA2-210ENST00000541363 GNPATO15228 680 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 RWDD2BP57060 319 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 IGBP1P78318 339 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 C10orf76Q5T2E6 689 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 GFM2Q969S9 779 aaKnown RBP16.53■□□□□ 0.24
HMGA2-210ENST00000541363 FAM149B1Q96BN6 582 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 VCPP55072 806 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms