RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 CC2D1BQ5T0F9 858 aaKnown RBP7.62□□□□□ -1.19
SUDS3-202ENST00000541280 NLRX1Q86UT6 975 aa7.62□□□□□ -1.19
SUDS3-202ENST00000541280 CFAP53Q96M91 514 aa7.62□□□□□ -1.19
SUDS3-202ENST00000541280 SLC6A18Q96N87 628 aa7.62□□□□□ -1.19
SUDS3-202ENST00000541280 NCAPD2Q15021 1401 aa7.61□□□□□ -1.19
SUDS3-202ENST00000541280 PARP4Q9UKK3 1724 aaKnown RBP7.61□□□□□ -1.19
SUDS3-202ENST00000541280 TMEM253P0C7T8 217 aa7.61□□□□□ -1.19
SUDS3-202ENST00000541280 RPL10P27635 214 aaKnown RBP7.61□□□□□ -1.19
SUDS3-202ENST00000541280 SULT6B1Q6IMI4 303 aa7.61□□□□□ -1.19
SUDS3-202ENST00000541280 SIAH1Q8IUQ4 282 aa7.61□□□□□ -1.19
SUDS3-202ENST00000541280 LRRC56Q8IYG6 542 aaPredicted RBP7.61□□□□□ -1.19
SUDS3-202ENST00000541280 RBBP8NLQ8NC74 664 aaPredicted RBP7.61□□□□□ -1.19
SUDS3-202ENST00000541280 ZSCAN18Q8TBC5 510 aaPredicted RBP7.61□□□□□ -1.19
SUDS3-202ENST00000541280 ZNF512BQ96KM6 892 aaPredicted RBP7.61□□□□□ -1.19
SUDS3-202ENST00000541280 MTFR1LQ9H019 292 aa7.61□□□□□ -1.19
SUDS3-202ENST00000541280 ZNF552Q9H707 407 aaPredicted RBP7.61□□□□□ -1.19
SUDS3-202ENST00000541280 KCNK12Q9HB15 430 aa7.61□□□□□ -1.19
SUDS3-202ENST00000541280 CHST7Q9NS84 486 aa7.61□□□□□ -1.19
SUDS3-202ENST00000541280 TMOD3Q9NYL9 352 aa7.61□□□□□ -1.19
SUDS3-202ENST00000541280 TFCP2L1Q9NZI6 479 aa7.61□□□□□ -1.19
SUDS3-202ENST00000541280 SUCOQ9UBS9 1254 aaKnown RBP7.61□□□□□ -1.19
SUDS3-202ENST00000541280 PPP1R1BQ9UD71 204 aaPredicted RBP7.61□□□□□ -1.19
SUDS3-202ENST00000541280 GPR160Q9UJ42 338 aa7.61□□□□□ -1.19
SUDS3-202ENST00000541280 CCNL1Q9UK58 526 aaPredicted RBP7.61□□□□□ -1.19
SUDS3-202ENST00000541280 NUDCQ9Y266 331 aa7.61□□□□□ -1.19
SUDS3-202ENST00000541280 HRKO00198 91 aa7.6□□□□□ -1.19
SUDS3-202ENST00000541280 ETV2O00321 342 aaPredicted RBP7.6□□□□□ -1.19
SUDS3-202ENST00000541280 PSPNO60542 156 aa7.6□□□□□ -1.19
SUDS3-202ENST00000541280 EFEMP2O95967 443 aa7.6□□□□□ -1.19
SUDS3-202ENST00000541280 ACRP10323 421 aa7.6□□□□□ -1.19
SUDS3-202ENST00000541280 ENDOUP21128 410 aaKnown RBP7.6□□□□□ -1.19
SUDS3-202ENST00000541280 PIGBQ92521 554 aa7.6□□□□□ -1.19
SUDS3-202ENST00000541280 FCRL2Q96LA5 508 aaPredicted RBP7.6□□□□□ -1.19
SUDS3-202ENST00000541280 DHRS1Q96LJ7 313 aa7.6□□□□□ -1.19
SUDS3-202ENST00000541280 MCOLN1Q9GZU1 580 aa7.6□□□□□ -1.19
SUDS3-202ENST00000541280 MKRN2Q9H000 416 aaKnown RBP7.6□□□□□ -1.19
SUDS3-202ENST00000541280 CRTAC1Q9NQ79 661 aa7.6□□□□□ -1.19
SUDS3-202ENST00000541280 PCDHB12Q9Y5F1 795 aa7.6□□□□□ -1.19
SUDS3-202ENST00000541280 MEGF6O75095 1541 aa7.6□□□□□ -1.19
SUDS3-202ENST00000541280 SEMA7AO75326 666 aa7.59□□□□□ -1.19
SUDS3-202ENST00000541280 USP2O75604 605 aaPredicted RBP7.59□□□□□ -1.19
SUDS3-202ENST00000541280 RECKO95980 971 aa7.59□□□□□ -1.19
SUDS3-202ENST00000541280 SYPP08247 313 aa7.59□□□□□ -1.19
SUDS3-202ENST00000541280 BMP8BP34820 402 aa7.59□□□□□ -1.19
SUDS3-202ENST00000541280 AUHQ13825 339 aaKnown RBP7.59□□□□□ -1.19
SUDS3-202ENST00000541280 ZNF394Q53GI3 561 aa7.59□□□□□ -1.19
SUDS3-202ENST00000541280 ZNF530Q6P9A1 599 aaPredicted RBP7.59□□□□□ -1.19
SUDS3-202ENST00000541280 ATG14Q6ZNE5 492 aa7.59□□□□□ -1.19
SUDS3-202ENST00000541280 AMIGO3Q86WK7 504 aa7.59□□□□□ -1.19
SUDS3-202ENST00000541280 RNF34Q969K3 372 aa7.59□□□□□ -1.19
SUDS3-202ENST00000541280 HHIPL1Q96JK4 782 aa7.59□□□□□ -1.19
SUDS3-202ENST00000541280 TM9SF2Q99805 663 aa7.59□□□□□ -1.19
SUDS3-202ENST00000541280 DDX41Q9UJV9 622 aaKnown RBP7.59□□□□□ -1.19
SUDS3-202ENST00000541280 KDRP35968 1356 aa7.59□□□□□ -1.2
SUDS3-202ENST00000541280 RGPD1P0DJD0 1748 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 MYOCOSA0A1B0GUC4 107 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 SSU72P8A0A1W2PR75 194 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 TCAF2A6NFQ2 919 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 SHOXO15266 292 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 ZNF205O95201 554 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 POLD1P28340 1107 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 CTSKP43235 329 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 RACK1P63244 317 aaKnown RBP7.58□□□□□ -1.2
SUDS3-202ENST00000541280 KCNA10Q16322 511 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 LCNL1Q6ZST4 164 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 PNNQ9H307 717 aaKnown RBP7.58□□□□□ -1.2
SUDS3-202ENST00000541280 TNFRSF10DQ9UBN6 386 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 ZMYM5Q9UJ78 669 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 LRRC37A3O60309 1634 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 PALLDQ8WX93 1383 aa7.58□□□□□ -1.2
SUDS3-202ENST00000541280 BRWD3Q6RI45 1802 aa7.57□□□□□ -1.2
SUDS3-202ENST00000541280 TEX51A0A1B0GUA7 166 aa7.57□□□□□ -1.2
SUDS3-202ENST00000541280 PMS1P54277 932 aaKnown RBP7.57□□□□□ -1.2
SUDS3-202ENST00000541280 ANKRD39Q53RE8 183 aa7.57□□□□□ -1.2
SUDS3-202ENST00000541280 KCNN1Q92952 543 aa7.57□□□□□ -1.2
SUDS3-202ENST00000541280 GFOD1Q9NXC2 390 aa7.57□□□□□ -1.2
SUDS3-202ENST00000541280 MINPP1Q9UNW1 487 aa7.57□□□□□ -1.2
SUDS3-202ENST00000541280 SMG5Q9UPR3 1016 aaKnown RBP7.57□□□□□ -1.2
SUDS3-202ENST00000541280 PCDHGB7Q9Y5F8 929 aa7.57□□□□□ -1.2
SUDS3-202ENST00000541280 PEAK1Q9H792 1746 aa7.56□□□□□ -1.2
SUDS3-202ENST00000541280 FADS2P1A8MWK0 482 aa7.56□□□□□ -1.2
SUDS3-202ENST00000541280 NPIPB6E9PJ23 425 aa7.56□□□□□ -1.2
SUDS3-202ENST00000541280 U2SURPO15042 1029 aaKnown RBP7.56□□□□□ -1.2
SUDS3-202ENST00000541280 ZBTB7AO95365 584 aa7.56□□□□□ -1.2
SUDS3-202ENST00000541280 PPP2R1AP30153 589 aa7.56□□□□□ -1.2
SUDS3-202ENST00000541280 COL9A2Q14055 689 aaPredicted RBP7.56□□□□□ -1.2
SUDS3-202ENST00000541280 RALBP1Q15311 655 aa7.56□□□□□ -1.2
SUDS3-202ENST00000541280 LCE4AQ5TA78 99 aa7.56□□□□□ -1.2
SUDS3-202ENST00000541280 ZPBP2Q6X784 338 aa7.56□□□□□ -1.2
SUDS3-202ENST00000541280 CEP128Q6ZU80 1094 aa7.56□□□□□ -1.2
SUDS3-202ENST00000541280 C7orf61Q8IZ16 206 aa7.56□□□□□ -1.2
SUDS3-202ENST00000541280 FAM208AQ9UK61 1670 aaKnown RBP7.55□□□□□ -1.2
SUDS3-202ENST00000541280 C9IYK1 514 aa7.55□□□□□ -1.2
SUDS3-202ENST00000541280 SCAMP3O14828 347 aaKnown RBP7.55□□□□□ -1.2
SUDS3-202ENST00000541280 HMOX1P09601 288 aa7.55□□□□□ -1.2
SUDS3-202ENST00000541280 PNLIPP16233 465 aa7.55□□□□□ -1.2
SUDS3-202ENST00000541280 LINC00310P59036 64 aa7.55□□□□□ -1.2
SUDS3-202ENST00000541280 DLG4P78352 724 aa7.55□□□□□ -1.2
SUDS3-202ENST00000541280 SLC14A2Q15849 920 aa7.55□□□□□ -1.2
SUDS3-202ENST00000541280 ZNF827Q17R98 1081 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms