RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ZMYND12Q9H0C1 365 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 EHMT1Q9H9B1 1298 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 C6orf50Q9HD87 102 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 PRDM5Q9NQX1 630 aaPredicted RBP10.57□□□□□ -0.72
SNHG1-215ENST00000540904 PCDH10Q9P2E7 1040 aa10.57□□□□□ -0.72
SNHG1-215ENST00000540904 SPATA31C2B4DYI2 1134 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 ADAMTS3O15072 1205 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 FIBPO43427 364 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 DEXIO95424 95 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 LARGE1O95461 756 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 GGPS1O95749 300 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 FOSP01100 380 aaPredicted RBP10.56□□□□□ -0.72
SNHG1-215ENST00000540904 ITGB5P18084 799 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 UBA1P22314 1058 aaKnown RBP10.56□□□□□ -0.72
SNHG1-215ENST00000540904 GNA11P29992 359 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 RBM25P49756 843 aaKnown RBP10.56□□□□□ -0.72
SNHG1-215ENST00000540904 CLK2P49760 499 aaKnown RBP10.56□□□□□ -0.72
SNHG1-215ENST00000540904 NLRP5P59047 1200 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 PSMC6P62333 389 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 PURAQ00577 322 aaKnown RBP10.56□□□□□ -0.72
SNHG1-215ENST00000540904 ITGA7Q13683 1181 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 LAMC2Q13753 1193 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 ME3Q16798 604 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 CELF3Q5SZQ8 465 aaKnown RBP10.56□□□□□ -0.72
SNHG1-215ENST00000540904 NLRX1Q86UT6 975 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 CCDC148Q8NFR7 591 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 SPATA33Q96N06 139 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 ANO3Q9BYT9 981 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 MLXIPQ9HAP2 919 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 POLR3EQ9NVU0 708 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 PRKAG2Q9UGJ0 569 aa10.56□□□□□ -0.72
SNHG1-215ENST00000540904 PDE4DIPQ5VU43 2346 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 C19orf67A6NJJ6 358 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 DCDC2CA8MYV0 355 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 ARVCFO00192 962 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 KPNA6O60684 536 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 CTDNEP1O95476 244 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 MMP3P08254 477 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 ICAM3P32942 547 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 CDK7P50613 346 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 CHMP4BP1P59074 171 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 SEMA3FQ13275 785 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 AP3B2Q13367 1082 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 MTMR1Q13613 665 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 MYSM1Q5VVJ2 828 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 ANKRD33Q7Z3H0 272 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 REXO1Q8N1G1 1221 aaKnown RBP10.55□□□□□ -0.72
SNHG1-215ENST00000540904 PPTC7Q8NI37 304 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 BICD2Q8TD16 824 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 GTF3C6Q969F1 213 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 EMID1Q96A84 441 aaPredicted RBP10.55□□□□□ -0.72
SNHG1-215ENST00000540904 AIFM3Q96NN9 605 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 MTG1Q9BT17 334 aaPredicted RBP10.55□□□□□ -0.72
SNHG1-215ENST00000540904 SH3GLB2Q9NR46 395 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 LIMCH1Q9UPQ0 1083 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 GRIN2DO15399 1336 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 MROH7Q68CQ1 1323 aa10.55□□□□□ -0.72
SNHG1-215ENST00000540904 CLTBP09497 229 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 ZNF76P36508 570 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 SREBF1P36956 1147 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 MAGEA10P43363 369 aaPredicted RBP10.54□□□□□ -0.72
SNHG1-215ENST00000540904 ARHGAP4P98171 946 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 SP4Q02446 784 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 FAAP100Q0VG06 881 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 NEDD9Q14511 834 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 DGKDQ16760 1214 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 HSDL1Q3SXM5 330 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 MCTP2Q6DN12 878 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 CYFIP1Q7L576 1253 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 SH3RF1Q7Z6J0 888 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 CYP2W1Q8TAV3 490 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 RASGRP4Q8TDF6 673 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 PPP1R13LQ8WUF5 828 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 GPRASP2Q96D09 838 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 CDHR1Q96JP9 859 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 TOX2Q96NM4 488 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 BCAS3Q9H6U6 928 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 JADE2Q9NQC1 790 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 PDLIM7Q9NR12 457 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 TMEM39AQ9NV64 488 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 PKD2L1Q9P0L9 805 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 ORC3Q9UBD5 711 aaPredicted RBP10.54□□□□□ -0.72
SNHG1-215ENST00000540904 COLQQ9Y215 455 aaPredicted RBP10.54□□□□□ -0.72
SNHG1-215ENST00000540904 UBIAD1Q9Y5Z9 338 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 STK36Q9NRP7 1315 aa10.54□□□□□ -0.72
SNHG1-215ENST00000540904 TRIM43BA6NCK2 446 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 NOP56O00567 594 aaKnown RBP10.53□□□□□ -0.72
SNHG1-215ENST00000540904 ATP9AO75110 1047 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 ZNF286BP0CG31 522 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 XBP1P17861 261 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 MDM2Q00987 491 aaPredicted RBP10.53□□□□□ -0.72
SNHG1-215ENST00000540904 RABEP1Q15276 862 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 NBPF20Q3BBV1 942 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 CEP55Q53EZ4 464 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 FAM47CQ5HY64 1035 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 METTL7BQ6UX53 244 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 FAM126BQ8IXS8 530 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 SLC43A3Q8NBI5 491 aa10.53□□□□□ -0.72
SNHG1-215ENST00000540904 TRIM43Q96BQ3 446 aaPredicted RBP10.53□□□□□ -0.72
SNHG1-215ENST00000540904 TBC1D32Q96NH3 1257 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms