RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 CATSPERGQ6ZRH7 1159 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 PRRT2Q7Z6L0 340 aaPredicted RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 REXO1Q8N1G1 1221 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 PROCA1Q8NCQ7 364 aaPredicted RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 BRI3BPQ8WY22 251 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 TSC1Q92574 1164 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 FOXJ1Q92949 421 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 CUL5Q93034 780 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 ATG4CQ96DT6 458 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 CHAMP1Q96JM3 812 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 ZMYND12Q9H0C1 365 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 GLT8D2Q9H1C3 349 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 RANBP17Q9H2T7 1088 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 RAVER2Q9HCJ3 691 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 RIC8AQ9NPQ8 531 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 MAP10Q9P2G4 905 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 BIN2Q9UBW5 565 aaPredicted RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 PNMA2Q9UL42 364 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 CCPG1Q9ULG6 757 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 PPP1R9AQ9ULJ8 1098 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 NOL7Q9UMY1 257 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 CNPY2Q9Y2B0 182 aa7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 MRPL11Q9Y3B7 192 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-206ENST00000540896 ESYT2A0FGR8 921 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 GOLGA6L4A6NEF3 574 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 H3BM21 787 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 VWA5AO00534 786 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 PPP1R11O60927 126 aaPredicted RBP7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 LILRB3O75022 631 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 ICAM1P05362 532 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 ALAS1P13196 640 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 PTMSP20962 102 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 MOGSQ13724 837 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 STK38Q15208 465 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 RILPL1Q5EBL4 403 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 TREML2Q5T2D2 321 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 JAKMIP3Q5VZ66 844 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 PIK3AP1Q6ZUJ8 805 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 KRT25Q7Z3Z0 450 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 DAGLBQ8NCG7 672 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 RASGRP4Q8TDF6 673 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 SPATA32Q96LK8 384 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 AGBL1Q96MI9 1066 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 PTPN18Q99952 460 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 KLF16Q9BXK1 252 aaPredicted RBP7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 SCAND2PQ9GZW5 306 aaPredicted RBP7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 SLC38A10Q9HBR0 1119 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 GDPD2Q9HCC8 539 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 HOMER2Q9NSB8 354 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 PCDHA6Q9UN73 950 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 AGTPBP1Q9UPW5 1226 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 PCDHA8Q9Y5H6 950 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 MYH4Q9Y623 1939 aa7.58□□□□□ -1.2
CLTCL1-206ENST00000540896 ABCB11O95342 1321 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 SPDYE3A6NKU9 549 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 GCOM1H8Y6P7 765 aaPredicted RBP7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 IGF2BP3O00425 579 aaKnown RBP eCLIP7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 CFBP00751 764 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 POLR2MP0CAP2 368 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 TAL1P17542 331 aaPredicted RBP7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 HOXA7P31268 230 aaPredicted RBP7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 MAP2K1Q02750 393 aaPredicted RBP7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 NONOQ15233 471 aaKnown RBP eCLIP7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 UBE2SQ16763 222 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 ANO1Q5XXA6 986 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 MCTP2Q6DN12 878 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 CLEC17AQ6ZS10 378 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 MCF2L2Q86YR7 1114 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 FAM43AQ8N2R8 423 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 SHISA4Q96DD7 197 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 P2RX7Q99572 595 aaKnown RBP7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 PAGR1Q9BTK6 254 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 ASCC2Q9H1I8 757 aaPredicted RBP7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 TMEM260Q9NX78 707 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 CEP131Q9UPN4 1083 aa7.57□□□□□ -1.2
CLTCL1-206ENST00000540896 MYPNQ86TC9 1320 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 BTBD19C9JJ37 291 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 PDHXO00330 501 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 TRPA1O75762 1119 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 ZIC2O95409 532 aaPredicted RBP7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 FOSP01100 380 aaPredicted RBP7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 HOXA13P31271 388 aaPredicted RBP7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 STAT3P40763 770 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 ME1P48163 572 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 OAZ1P54368 228 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 NPY5RQ15761 445 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 INF2Q27J81 1249 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 TTC38Q5R3I4 469 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 SNRNP48Q6IEG0 339 aaKnown RBP7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 GPAT2Q6NUI2 795 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 USP17L6PQ6QN14 398 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 ANKRD23Q86SG2 305 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 FCHSD1Q86WN1 690 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 MB21D1Q8N884 522 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 JMYQ8N9B5 988 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 SMCR8Q8TEV9 937 aaPredicted RBP7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 TRERF1Q96PN7 1200 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 PURBQ96QR8 312 aaKnown RBP7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 USP28Q96RU2 1077 aa7.56□□□□□ -1.2
CLTCL1-206ENST00000540896 FTOQ9C0B1 505 aaKnown RBP eCLIP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms