RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 AKAP17AQ02040 695 aaKnown RBP19.36■□□□□ 0.69
CD9-209ENST00000540891 LAMC2Q13753 1193 aa19.36■□□□□ 0.69
CD9-209ENST00000540891 ANKRD1Q15327 319 aa19.36■□□□□ 0.69
CD9-209ENST00000540891 GNPTABQ3T906 1256 aa19.36■□□□□ 0.69
CD9-209ENST00000540891 BRDTQ58F21 947 aaPredicted RBP19.36■□□□□ 0.69
CD9-209ENST00000540891 CELF3Q5SZQ8 465 aaKnown RBP19.36■□□□□ 0.69
CD9-209ENST00000540891 MYSM1Q5VVJ2 828 aa19.36■□□□□ 0.69
CD9-209ENST00000540891 MTG1Q9BT17 334 aaPredicted RBP19.36■□□□□ 0.69
CD9-209ENST00000540891 PRDM5Q9NQX1 630 aaPredicted RBP19.36■□□□□ 0.69
CD9-209ENST00000540891 VPS54Q9P1Q0 977 aa19.36■□□□□ 0.69
CD9-209ENST00000540891 UBIAD1Q9Y5Z9 338 aa19.36■□□□□ 0.69
CD9-209ENST00000540891 MROH7Q68CQ1 1323 aa19.35■□□□□ 0.69
CD9-209ENST00000540891 CPLX1O14810 134 aa19.35■□□□□ 0.69
CD9-209ENST00000540891 FIBPO43427 364 aa19.35■□□□□ 0.69
CD9-209ENST00000540891 ITGB8P26012 769 aa19.35■□□□□ 0.69
CD9-209ENST00000540891 MDM2Q00987 491 aaPredicted RBP19.35■□□□□ 0.69
CD9-209ENST00000540891 SSRP1Q08945 709 aaKnown RBP19.35■□□□□ 0.69
CD9-209ENST00000540891 AP3B2Q13367 1082 aa19.35■□□□□ 0.69
CD9-209ENST00000540891 HSDL1Q3SXM5 330 aa19.35■□□□□ 0.69
CD9-209ENST00000540891 DHX37Q8IY37 1157 aaKnown RBP19.35■□□□□ 0.69
CD9-209ENST00000540891 PPTC7Q8NI37 304 aa19.35■□□□□ 0.69
CD9-209ENST00000540891 GLT8D2Q9H1C3 349 aa19.35■□□□□ 0.69
CD9-209ENST00000540891 SLKQ9H2G2 1235 aaPredicted RBP19.35■□□□□ 0.69
CD9-209ENST00000540891 SCN10AQ9Y5Y9 1956 aa19.35■□□□□ 0.69
CD9-209ENST00000540891 DCDC2CA8MYV0 355 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 KIAA0355O15063 1070 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 KPNA6O60684 536 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 DTNBO60941 627 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 CTDNEP1O95476 244 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 FOSP01100 380 aaPredicted RBP19.34■□□□□ 0.69
CD9-209ENST00000540891 CD4P01730 458 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 HOXD8P13378 290 aaPredicted RBP19.34■□□□□ 0.69
CD9-209ENST00000540891 ME3Q16798 604 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 HABP4Q5JVS0 413 aaKnown RBP19.34■□□□□ 0.69
CD9-209ENST00000540891 JAKMIP3Q5VZ66 844 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 TRIM22Q8IYM9 498 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 CCDC12Q8WUD4 166 aaPredicted RBP19.34■□□□□ 0.69
CD9-209ENST00000540891 PPP1R13LQ8WUF5 828 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 KAT2BQ92831 832 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 AIFM3Q96NN9 605 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 PRKAG2Q9UGJ0 569 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 TBX21Q9UL17 535 aa19.34■□□□□ 0.69
CD9-209ENST00000540891 ATP9AO75110 1047 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 DEXIO95424 95 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 BMP8BP34820 402 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 SREBF1P36956 1147 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 RBM25P49756 843 aaKnown RBP19.33■□□□□ 0.68
CD9-209ENST00000540891 CPLX2Q6PUV4 134 aaKnown RBP19.33■□□□□ 0.68
CD9-209ENST00000540891 NLRX1Q86UT6 975 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 NECAB1Q8N987 351 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 CRYGNQ8WXF5 182 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 GPRASP2Q96D09 838 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 SPATA33Q96N06 139 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 C22orf23Q9BZE7 217 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 C6orf50Q9HD87 102 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 JADE2Q9NQC1 790 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 SH3GLB2Q9NR46 395 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 TELO2Q9Y4R8 837 aa19.33■□□□□ 0.68
CD9-209ENST00000540891 RANBP2P49792 3224 aaKnown RBP19.33■□□□□ 0.68
CD9-209ENST00000540891 B4GALT4O60513 344 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 ST3GAL1Q11201 340 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 DGKDQ16760 1214 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 NBPF20Q3BBV1 942 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 CCDC148Q8NFR7 591 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 CYP2W1Q8TAV3 490 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 RASGRP4Q8TDF6 673 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 BADQ92934 168 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 SENP7Q9BQF6 1050 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 SEZ6LQ9BYH1 1024 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 EHMT1Q9H9B1 1298 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 MLXIPQ9HAP2 919 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 TMEM39AQ9NV64 488 aa19.32■□□□□ 0.68
CD9-209ENST00000540891 MYH7BA7E2Y1 1941 aa19.31■□□□□ 0.68
CD9-209ENST00000540891 STK36Q9NRP7 1315 aa19.31■□□□□ 0.68
CD9-209ENST00000540891 KCNA2P16389 499 aa19.31■□□□□ 0.68
CD9-209ENST00000540891 GNA11P29992 359 aa19.31■□□□□ 0.68
CD9-209ENST00000540891 MTMR1Q13613 665 aa19.31■□□□□ 0.68
CD9-209ENST00000540891 NEDD9Q14511 834 aa19.31■□□□□ 0.68
CD9-209ENST00000540891 METTL7BQ6UX53 244 aa19.31■□□□□ 0.68
CD9-209ENST00000540891 CYFIP1Q7L576 1253 aa19.31■□□□□ 0.68
CD9-209ENST00000540891 REXO1Q8N1G1 1221 aaKnown RBP19.31■□□□□ 0.68
CD9-209ENST00000540891 GTF3C6Q969F1 213 aa19.31■□□□□ 0.68
CD9-209ENST00000540891 MXRA8Q9BRK3 442 aa19.31■□□□□ 0.68
CD9-209ENST00000540891 TRPV6Q9H1D0 765 aa19.31■□□□□ 0.68
CD9-209ENST00000540891 TLR3O15455 904 aaKnown RBP19.3■□□□□ 0.68
CD9-209ENST00000540891 PPFIA4O75335 1185 aa19.3■□□□□ 0.68
CD9-209ENST00000540891 CDKL5O76039 1030 aa19.3■□□□□ 0.68
CD9-209ENST00000540891 F2P00734 622 aa19.3■□□□□ 0.68
CD9-209ENST00000540891 ZNF286BP0CG31 522 aa19.3■□□□□ 0.68
CD9-209ENST00000540891 ARHGAP4P98171 946 aa19.3■□□□□ 0.68
CD9-209ENST00000540891 NPY5RQ15761 445 aa19.3■□□□□ 0.68
CD9-209ENST00000540891 LBHD1Q9BQE6 289 aaPredicted RBP19.3■□□□□ 0.68
CD9-209ENST00000540891 C16orf70Q9BSU1 422 aa19.3■□□□□ 0.68
CD9-209ENST00000540891 TRMT13Q9NUP7 481 aaKnown RBP19.3■□□□□ 0.68
CD9-209ENST00000540891 DOCK5Q9H7D0 1870 aa19.29■□□□□ 0.68
CD9-209ENST00000540891 HAS3O00219 553 aa19.29■□□□□ 0.68
CD9-209ENST00000540891 EDIL3O43854 480 aa19.29■□□□□ 0.68
CD9-209ENST00000540891 NLRP5P59047 1200 aa19.29■□□□□ 0.68
CD9-209ENST00000540891 CEP55Q53EZ4 464 aa19.29■□□□□ 0.68
CD9-209ENST00000540891 NFRKBQ6P4R8 1299 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms