RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 FRMD3A2A2Y4 597 aa15.35■□□□□ 0.05
RTN3-210ENST00000540798 B4DLN1 442 aa15.35■□□□□ 0.05
RTN3-210ENST00000540798 FAM86B1E9PN63 330 aa15.35■□□□□ 0.05
RTN3-210ENST00000540798 FAM86B2P0C5J1 330 aa15.35■□□□□ 0.05
RTN3-210ENST00000540798 KRT9P35527 623 aa15.35■□□□□ 0.05
RTN3-210ENST00000540798 BAG6P46379 1132 aa15.35■□□□□ 0.05
RTN3-210ENST00000540798 COASYQ13057 564 aa15.35■□□□□ 0.05
RTN3-210ENST00000540798 TRAF1Q13077 416 aa15.35■□□□□ 0.05
RTN3-210ENST00000540798 ZCWPW2Q504Y3 356 aa15.35■□□□□ 0.05
RTN3-210ENST00000540798 FIGNQ5HY92 759 aa15.35■□□□□ 0.05
RTN3-210ENST00000540798 FAM20AQ96MK3 541 aa15.35■□□□□ 0.05
RTN3-210ENST00000540798 MED24O75448 989 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 LRRC55Q6ZSA7 311 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 STK24Q9Y6E0 443 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 SPDYE3A6NKU9 549 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 MARCH6O60337 910 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 SLC12A3P55017 1021 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 MEA1Q16626 185 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 SPICE1Q8N0Z3 855 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 NUP58Q9BVL2 599 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 KIAA1024Q9UPX6 916 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 SRCAPQ6ZRS2 3230 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 POTEB3A0JP26 581 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 POTECB2RU33 542 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 E9PMD0 336 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 PLA2G4BP0C869 781 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 MAP3K9P80192 1104 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 IKQ13123 557 aaPredicted RBP15.34■□□□□ 0.05
RTN3-210ENST00000540798 POTEBQ6S5H4 581 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 CDAN1Q8IWY9 1227 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 NIM1KQ8IY84 436 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 PDCL2Q8N4E4 241 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 OR8K1Q8NGG5 319 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 VCPKMTQ9H867 229 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 VAV3Q9UKW4 847 aa15.34■□□□□ 0.05
RTN3-210ENST00000540798 GOLGB1Q14789 3259 aaKnown RBP15.33■□□□□ 0.05
RTN3-210ENST00000540798 A0A1W2PQJ5 194 aa15.33■□□□□ 0.05
RTN3-210ENST00000540798 NKRFO15226 690 aaKnown RBP eCLIP15.33■□□□□ 0.05
RTN3-210ENST00000540798 TAL1P17542 331 aaPredicted RBP15.33■□□□□ 0.05
RTN3-210ENST00000540798 CAP2P40123 477 aa15.33■□□□□ 0.05
RTN3-210ENST00000540798 GNG11P61952 73 aa15.33■□□□□ 0.05
RTN3-210ENST00000540798 PRR16Q569H4 304 aa15.33■□□□□ 0.05
RTN3-210ENST00000540798 FAM83BQ5T0W9 1011 aa15.33■□□□□ 0.05
RTN3-210ENST00000540798 CREBRFQ8IUR6 639 aa15.33■□□□□ 0.05
RTN3-210ENST00000540798 TMEM39BQ9GZU3 492 aa15.33■□□□□ 0.05
RTN3-210ENST00000540798 PITPNM2Q9BZ72 1349 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 IGLV3-22A0A075B6J6 115 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 SPATA31C1P0DKV0 1188 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 CYP11B2P19099 503 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 CASQ1P31415 396 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 STAT3P40763 770 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 HAUS3Q68CZ6 603 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 WDR59Q6PJI9 974 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 DEFB132Q7Z7B7 95 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 LRRN4CLQ8ND94 238 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 GLIS3Q8NEA6 775 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 IQCDQ96DY2 449 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 PANK4Q9NVE7 773 aa15.33■□□□□ 0.04
RTN3-210ENST00000540798 CGNQ9P2M7 1197 aaKnown RBP15.33■□□□□ 0.04
RTN3-210ENST00000540798 A0A0U1RQJ8 604 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 MSH4O15457 936 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 RPA1P27694 616 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 TGFB2P61812 414 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 CXCL9Q07325 125 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 CATSPER3Q86XQ3 398 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 ATRIPQ8WXE1 791 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 NOC4LQ9BVI4 516 aaKnown RBP15.32■□□□□ 0.04
RTN3-210ENST00000540798 DEFB129Q9H1M3 183 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 LUC7L2Q9Y383 392 aaKnown RBP15.32■□□□□ 0.04
RTN3-210ENST00000540798 FGFR1OPO95684 399 aaKnown RBP15.32■□□□□ 0.04
RTN3-210ENST00000540798 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 ARSHQ5FYA8 562 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 ZC3H3Q8IXZ2 948 aaKnown RBP15.32■□□□□ 0.04
RTN3-210ENST00000540798 KCTD17Q8N5Z5 321 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 IDEP14735 1019 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 ARHGAP25P42331 645 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 MTIF2P46199 727 aaKnown RBP15.32■□□□□ 0.04
RTN3-210ENST00000540798 TBC1D8BQ0IIM8 1120 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 MYOCDQ8IZQ8 938 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 CHURC1Q8WUH1 139 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 MRFAP1Q9Y605 127 aa15.32■□□□□ 0.04
RTN3-210ENST00000540798 WNT10BO00744 389 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 HOXA13P31271 388 aaPredicted RBP15.31■□□□□ 0.04
RTN3-210ENST00000540798 CBX1P83916 185 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 VWA3BQ502W6 1294 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 FAM26FQ5R3K3 315 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 FAM160B2Q86V87 743 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 ACRBPQ8NEB7 543 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 CHP1Q99653 195 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
RTN3-210ENST00000540798 SH2D4AQ9H788 454 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 VEZTQ9HBM0 779 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 BMP2KQ9NSY1 1161 aaPredicted RBP15.31■□□□□ 0.04
RTN3-210ENST00000540798 SIK3Q9Y2K2 1263 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 REXO2Q9Y3B8 237 aaKnown RBP15.31■□□□□ 0.04
RTN3-210ENST00000540798 GPBP1Q86WP2 473 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 CCDC65Q8IXS2 484 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 ERMNQ8TAM6 284 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 EEF2KMTQ96G04 330 aa15.31■□□□□ 0.04
RTN3-210ENST00000540798 URI1O94763 535 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms