RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 ZBTB43O43298 467 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 HMGB1P09429 215 aaKnown RBP13.2□□□□□ -0.3
TMEM258-205ENST00000540434 C6orf222P0C671 652 aaPredicted RBP13.2□□□□□ -0.3
TMEM258-205ENST00000540434 TAP1Q03518 808 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 GNASQ5JWF2 1037 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 RNF207Q6ZRF8 634 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 HFE2Q6ZVN8 426 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 ZNF467Q7Z7K2 595 aaPredicted RBP13.2□□□□□ -0.3
TMEM258-205ENST00000540434 FBXL16Q8N461 479 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 PRSS33Q8NF86 280 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
TMEM258-205ENST00000540434 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.2□□□□□ -0.3
TMEM258-205ENST00000540434 SYTL5Q8TDW5 730 aaPredicted RBP13.2□□□□□ -0.3
TMEM258-205ENST00000540434 KIF2CQ99661 725 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 AMNQ9BXJ7 453 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 TM6SF1Q9BZW5 370 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 ZHX1Q9UKY1 873 aaPredicted RBP13.2□□□□□ -0.3
TMEM258-205ENST00000540434 PCDHA1Q9Y5I3 950 aa13.2□□□□□ -0.3
TMEM258-205ENST00000540434 GRIN2DO15399 1336 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 ABCB11O95342 1321 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 CNTNAP5Q8WYK1 1306 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 ST18O60284 1047 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 ALADP13716 330 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 PDIA3P30101 505 aaKnown RBP13.19□□□□□ -0.3
TMEM258-205ENST00000540434 HOXA13P31271 388 aaPredicted RBP13.19□□□□□ -0.3
TMEM258-205ENST00000540434 ALDH5A1P51649 535 aaPredicted RBP13.19□□□□□ -0.3
TMEM258-205ENST00000540434 EVCP57679 992 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 ACVR2BQ13705 512 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 CCDC144BQ3MJ40 725 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 TAPT1Q6NXT6 567 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 EEPD1Q7L9B9 569 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 RGS22Q8NE09 1264 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 IL17RAQ96F46 866 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
TMEM258-205ENST00000540434 NCOA5Q9HCD5 579 aaKnown RBP13.19□□□□□ -0.3
TMEM258-205ENST00000540434 ZNF318Q5VUA4 2279 aa13.19□□□□□ -0.3
TMEM258-205ENST00000540434 COL4A4P53420 1690 aaPredicted RBP13.18□□□□□ -0.3
TMEM258-205ENST00000540434 TET1Q8NFU7 2136 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 PTPRSQ13332 1948 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 GOLGA8AA7E2F4 631 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 GOLGA8BA8MQT2 603 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 PSMA5P28066 241 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 SMARCA1P28370 1054 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 KIF5BP33176 963 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 CCT2P78371 535 aaKnown RBP13.18□□□□□ -0.3
TMEM258-205ENST00000540434 BEX3Q00994 111 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 NTRK3Q16288 839 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 RTN1Q16799 776 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 MORC4Q8TE76 937 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 GDPD5Q8WTR4 605 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 NOC4LQ9BVI4 516 aaKnown RBP13.18□□□□□ -0.3
TMEM258-205ENST00000540434 TRPV6Q9H1D0 765 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 UBE2ZQ9H832 354 aaPredicted RBP13.18□□□□□ -0.3
TMEM258-205ENST00000540434 NAP1L2Q9ULW6 460 aaPredicted RBP13.18□□□□□ -0.3
TMEM258-205ENST00000540434 CYP46A1Q9Y6A2 500 aa13.18□□□□□ -0.3
TMEM258-205ENST00000540434 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
TMEM258-205ENST00000540434 DCXO43602 365 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 CFBP00751 764 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 CALM1P0DP23 149 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 CALM2P0DP24 149 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 CALM3P0DP25 149 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 HSD17B4P51659 736 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 GHRHRQ02643 423 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 DEFB128Q7Z7B8 93 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 FBXO16Q8IX29 292 aaPredicted RBP13.17□□□□□ -0.3
TMEM258-205ENST00000540434 IL31RAQ8NI17 732 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 GPKOWQ92917 476 aaPredicted RBP eCLIP13.17□□□□□ -0.3
TMEM258-205ENST00000540434 KCNH6Q9H252 994 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 ABHD16BQ9H3Z7 469 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 PDRG1Q9NUG6 133 aa13.17□□□□□ -0.3
TMEM258-205ENST00000540434 MRPL11Q9Y3B7 192 aaKnown RBP13.17□□□□□ -0.3
TMEM258-205ENST00000540434 ZDBF2Q9HCK1 2354 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 LARGE1O95461 756 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 KCNA5P22460 613 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 EDNRBP24530 442 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 GNAQP50148 359 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 FGD1P98174 961 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 PKN1Q16512 942 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 IER5LQ5T953 404 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 USP17L6PQ6QN14 398 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 RPUSD2Q8IZ73 545 aaKnown RBP13.16□□□□□ -0.3
TMEM258-205ENST00000540434 PHKBQ93100 1093 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 RRP36Q96EU6 259 aaKnown RBP13.16□□□□□ -0.3
TMEM258-205ENST00000540434 LZTS2Q9BRK4 669 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 SPC25Q9HBM1 224 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 FAM86C1Q9NVL1 165 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 TPCN1Q9ULQ1 816 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 NID2Q14112 1375 aa13.16□□□□□ -0.3
TMEM258-205ENST00000540434 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.15□□□□□ -0.3
TMEM258-205ENST00000540434 LCHNA4D1U4 455 aa13.15□□□□□ -0.3
TMEM258-205ENST00000540434 MEIS2O14770 477 aa13.15□□□□□ -0.3
TMEM258-205ENST00000540434 B4GALT4O60513 344 aa13.15□□□□□ -0.3
TMEM258-205ENST00000540434 ARIH2O95376 493 aa13.15□□□□□ -0.3
TMEM258-205ENST00000540434 SMPD1P17405 629 aa13.15□□□□□ -0.3
TMEM258-205ENST00000540434 METAP2P50579 478 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMEM258-205ENST00000540434 AK2P54819 239 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms