RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 GPAA1O43292 621 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 NBNO60934 754 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 LGR5O75473 907 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 ZMYND10O75800 440 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 GH1P01241 217 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 CHGBP05060 677 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 RB1P06400 928 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 FECHP22830 423 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 EDNRBP24530 442 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 CALML3P27482 149 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 PTPN5P54829 565 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 CHMP4BP1P59074 171 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 SNAP25P60880 206 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 DEFB103AP81534 67 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 HTRA4P83105 476 aaPredicted RBP6.98□□□□□ -1.29
CPSF7-219ENST00000539952 ZP2Q05996 745 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 PTK7Q13308 1070 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 GPM6BQ13491 265 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 DGKDQ16760 1214 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 EPC2Q52LR7 807 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 HERC4Q5GLZ8 1057 aaPredicted RBP6.98□□□□□ -1.29
CPSF7-219ENST00000539952 GDF6Q6KF10 455 aaPredicted RBP6.98□□□□□ -1.29
CPSF7-219ENST00000539952 EP400NLQ6ZTU2 488 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 SPRED2Q7Z698 418 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 C7orf31Q8N865 590 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 DCAF4Q8WV16 495 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 EDAQ92838 391 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 C17orf80Q9BSJ5 609 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 KATNAL1Q9BW62 490 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 NSUN3Q9H649 340 aaKnown RBP6.98□□□□□ -1.29
CPSF7-219ENST00000539952 CDHR5Q9HBB8 845 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 ECHDC1Q9NTX5 307 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 GTF2IRD1Q9UHL9 959 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 DDX49Q9Y6V7 483 aaKnown RBP6.98□□□□□ -1.29
CPSF7-219ENST00000539952 CHD7Q9P2D1 2997 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 NAV1Q8NEY1 1877 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 EMSYQ7Z589 1322 aa6.98□□□□□ -1.29
CPSF7-219ENST00000539952 TET1Q8NFU7 2136 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 H3BQ06 376 aaPredicted RBP6.97□□□□□ -1.29
CPSF7-219ENST00000539952 PPFIA4O75335 1185 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 NUDT7P0C024 238 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 IRS1P35568 1242 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 NOVP48745 357 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 RPS6P62753 249 aaKnown RBP6.97□□□□□ -1.29
CPSF7-219ENST00000539952 PPARAQ07869 468 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 LAMC2Q13753 1193 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 COL19A1Q14993 1142 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 SMAD2Q15796 467 aaKnown RBP6.97□□□□□ -1.29
CPSF7-219ENST00000539952 STXBP2Q15833 593 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 SYDE2Q5VT97 1194 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 FAM117BQ6P1L5 589 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 CCDC62Q6P9F0 684 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 HFE2Q6ZVN8 426 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 TMCO2Q7Z6W1 182 aaPredicted RBP6.97□□□□□ -1.29
CPSF7-219ENST00000539952 GPIHBP1Q8IV16 184 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 SIRT2Q8IXJ6 389 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 TMEM192Q8IY95 271 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 AFG1LQ8WV93 481 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 KAT2BQ92831 832 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 COPS5Q92905 334 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 TOP1MTQ969P6 601 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 PBXIP1Q96AQ6 731 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 GPATCH3Q96I76 525 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 IWS1Q96ST2 819 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 LRRCC1Q9C099 1032 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 NAPBQ9H115 298 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 IL17RBQ9NRM6 502 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 CLDND1Q9NY35 253 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 BAHCC1Q9P281 2608 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 HDAC6Q9UBN7 1215 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 DDX19BQ9UMR2 479 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 MYH8P13535 1937 aa6.97□□□□□ -1.29
CPSF7-219ENST00000539952 BAZ2AQ9UIF9 1905 aaKnown RBP6.97□□□□□ -1.29
CPSF7-219ENST00000539952 PLIN4Q96Q06 1357 aa6.96□□□□□ -1.29
CPSF7-219ENST00000539952 LRRC37A2A6NM11 1700 aa6.96□□□□□ -1.29
CPSF7-219ENST00000539952 RSPH10B2B2RC85 870 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 NFIBO00712 420 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 MMP3P08254 477 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 RSPH10BP0C881 870 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 SLC16A2P36021 539 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 PSEN2P49810 448 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 CCDC96Q2M329 555 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 GLIPR1L2Q4G1C9 344 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 TCEAL5Q5H9L2 206 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 ZNF618Q5T7W0 954 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.96□□□□□ -1.3
CPSF7-219ENST00000539952 SEPT14Q6ZU15 432 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 RNF135Q8IUD6 432 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 MYOCDQ8IZQ8 938 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 DBF4BQ8NFT6 615 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 NSUN6Q8TEA1 469 aaKnown RBP6.96□□□□□ -1.3
CPSF7-219ENST00000539952 PPP1R13LQ8WUF5 828 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 CLEC4DQ8WXI8 215 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 SEPT8Q92599 483 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 DHX38Q92620 1227 aaKnown RBP6.96□□□□□ -1.3
CPSF7-219ENST00000539952 CHMP4CQ96CF2 233 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 TTC14Q96N46 770 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 CTAGE1Q96RT6 745 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 LMAN2LQ9H0V9 348 aa6.96□□□□□ -1.3
CPSF7-219ENST00000539952 EPB41L4AQ9HCS5 686 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms