RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 TTMPQ5BVD1 217 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 EMC10Q5UCC4 262 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 USP17L2Q6R6M4 530 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 C16orf86Q6ZW13 317 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 CERS3Q8IU89 383 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 IQCKQ8N0W5 287 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 ANKRD13CQ8N6S4 541 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 BCAS4Q8TDM0 211 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 ARL8AQ96BM9 186 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 RUFY1Q96T51 708 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 PSMB7Q99436 277 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 EYA3Q99504 573 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 LUC7LQ9NQ29 371 aaKnown RBP10.68□□□□□ -0.7
CDH13-204ENST00000539548 TMEM260Q9NX78 707 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 SMARCAL1Q9NZC9 954 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 EHD2Q9NZN4 543 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 SBF2Q86WG5 1849 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 COL24A1Q17RW2 1714 aa10.68□□□□□ -0.7
CDH13-204ENST00000539548 SHTN1A0MZ66 631 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 GRID2IPA4D2P6 1211 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 EDIL3O43854 480 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 NOL4O94818 638 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 NOVP48745 357 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 MRPS25P82663 173 aaKnown RBP10.67□□□□□ -0.7
CDH13-204ENST00000539548 FKBP3Q00688 224 aaKnown RBP10.67□□□□□ -0.7
CDH13-204ENST00000539548 DIXDC1Q155Q3 683 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 TMEM119Q4V9L6 283 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 ZCWPW2Q504Y3 356 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 SFMBT2Q5VUG0 894 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 MAPKAPK5Q8IW41 473 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 MYOCDQ8IZQ8 938 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 MREGQ8N565 214 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 DDX12PQ92771 950 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 SETDB2Q96T68 719 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 VAT1LQ9HCJ6 419 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 SAP30BPQ9UHR5 308 aaKnown RBP10.67□□□□□ -0.7
CDH13-204ENST00000539548 COL4A3BPQ9Y5P4 624 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 FAM169AQ9Y6X4 670 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 SNED1Q8TER0 1413 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 BUB1O43683 1085 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 ATP2B2Q01814 1243 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 PAK2Q13177 524 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 FAM83BQ5T0W9 1011 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 KRT79Q5XKE5 535 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 ICE2Q659A1 982 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 NBPF5PQ86XG9 351 aaPredicted RBP10.67□□□□□ -0.7
CDH13-204ENST00000539548 CD302Q8IX05 232 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 MS4A14Q96JA4 679 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 ZIM3Q96PE6 472 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 EHD4Q9H223 541 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 NARFQ9UHQ1 456 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 LEMD3Q9Y2U8 911 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 ATP6V0A2Q9Y487 856 aa10.67□□□□□ -0.7
CDH13-204ENST00000539548 DDX60LQ5H9U9 1706 aaKnown RBP10.67□□□□□ -0.7
CDH13-204ENST00000539548 SLC37A4O43826 429 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 TLR2O60603 784 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 GLI1P08151 1106 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 LRRC41Q15345 812 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 GRIK5Q16478 980 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 SKIDA1Q1XH10 827 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 TDRD12Q587J7 1177 aaKnown RBP10.66□□□□□ -0.7
CDH13-204ENST00000539548 CFAP58Q5T655 872 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 MEI1Q5TIA1 1274 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 TPTE2Q6XPS3 522 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 C1orf131Q8NDD1 294 aaKnown RBP10.66□□□□□ -0.7
CDH13-204ENST00000539548 SNX29Q8TEQ0 813 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 DNAJC19Q96DA6 116 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 CEP63Q96MT8 703 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 NUDT12Q9BQG2 462 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 RTFDC1Q9BY42 306 aaPredicted RBP10.66□□□□□ -0.7
CDH13-204ENST00000539548 TANGO6Q9C0B7 1094 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 CNTNAP4Q9C0A0 1308 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 KCNQ2O43526 872 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 PALMO75781 387 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 GNA14O95837 355 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 CARSP49589 748 aaKnown RBP10.66□□□□□ -0.7
CDH13-204ENST00000539548 ADCY7P51828 1080 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 NAP1L1P55209 391 aaKnown RBP10.66□□□□□ -0.7
CDH13-204ENST00000539548 MARSP56192 900 aaKnown RBP10.66□□□□□ -0.7
CDH13-204ENST00000539548 KDM7AQ6ZMT4 941 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 B4GALNT4Q76KP1 1039 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 KCNK18Q7Z418 384 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 IPO4Q8TEX9 1081 aaKnown RBP10.66□□□□□ -0.7
CDH13-204ENST00000539548 CEP95Q96GE4 821 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 EPB41L5Q9HCM4 733 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 NLRC4Q9NPP4 1024 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 NFU1Q9UMS0 254 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 PCDHGC5Q9Y5F6 944 aa10.66□□□□□ -0.7
CDH13-204ENST00000539548 GPR75-ASB3A0A0A6YYF3 556 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 POTEMA6NI47 508 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 USP17L5A8MUK1 530 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 TRAF5O00463 557 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 HEXIM1O94992 359 aaKnown RBP10.65□□□□□ -0.7
CDH13-204ENST00000539548 TDP2O95551 362 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 FAM153BP0C7A2 387 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 COASYQ13057 564 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 CDC37Q16543 378 aaPredicted RBP10.65□□□□□ -0.7
CDH13-204ENST00000539548 SLC18A3Q16572 532 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 FAM153CQ494X1 144 aa10.65□□□□□ -0.7
CDH13-204ENST00000539548 CCDC40Q4G0X9 1142 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms